Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq406 122 6e-23 >seq406 Length=409633 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| ||||| | || |||| |||| ||| |||||||| || Sbjct 107281 TCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCCAACTGCTTTCCGGCGAAA 107222 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||||||| |||| | |||||||| || ||||||| || ||| Sbjct 107221 ATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATCTTGAATCTTCGTCTTTACGTTG 107162 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||| || || | || || || ||||| || ||||| ||||| Sbjct 107161 TCAATGGTATCAGAGGACTCGACTTCCAACGTAATCGTCTTTCCGGTAAGAGTTTTCACG 107102 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 107101 AAAATCTGCATA 107090 Score = 120 bits (132), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||||| || ||||| || || || |||||||| | || |||| || Sbjct 107528 AACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCTTC 107469 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| || || ||||| || || |||||||| || | || | |||||||| || Sbjct 107468 CAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTTATCTTG 107409 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| || || | ||||||| || | |||||| || | ||| || | Sbjct 107408 GATCTTGGTCTTCAC----GTTATCGATGGTGTCGGAGCTCTCAACTTCCAAGGTGATCG 107353 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||||| ||||||||||| || |||||||||||| Sbjct 107352 TTTTTCCGGTGAGAGTCTTGACGAAGATCTGCATA 107318 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||| | |||| || ||||| ||||| ||||| || || | || |||| || Sbjct 107072 AACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTC 107013 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||||||||| || || |||||||||||| |||| | ||||||||| || Sbjct 107012 AAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATCTTG 106953 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || ||| |||||| | || | ||| || ||| || || | || || || || Sbjct 106952 GATTTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTT 106893 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| |||||||| || || || ||||| Sbjct 106892 CCCCGTAAGAGTCTTAACGAATATTTGCAT 106863 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| || | ||||| ||| |||||||| ||||| || || || || | || |||| Sbjct 106847 CAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTACGGCCATC 106788 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || || || || || || || ||||||||||| | || | ||||||||||| Sbjct 106787 CTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC 106728 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||||| ||||| | |||| |||| || ||| || || | ||| ||||| Sbjct 106727 CTGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCACCTCAAGGGTGATGGT 106668 Query 34949 TTTTCCCGTGAGAGTCTTCAC 34969 || || || || ||||| || Sbjct 106667 CTTGCCAGTAAGGGTCTTGAC 106647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631336898016