Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05]
572 sequences; 22,032,815 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq406 116 3e-20
>seq406
Length=409633
Score = 116 bits (128), Expect = 3e-20
Identities = 160/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
|||||| || ||||| || || || ||||| ||| ||||| |||| ||||| |
Sbjct 107309 GAGACGAAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACG 107250
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||| || | || |||||||| ||||| || | |||||| || || |||||||| ||
Sbjct 107249 GCCATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTC 107190
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434
||||||||||| || ||||| ||||| ||||||| | || | | ||| | |
Sbjct 107189 CTTATCTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAG-GACTCGACTTCCAACG 107131
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||| || || || ||||||||||| |||||||| ||||||
Sbjct 107130 TAATCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCATA 107090
Score = 91.5 bits (100), Expect = 1e-12
Identities = 116/157 (74%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378
||| ||||| || |||||||||||||| || | |||||| || || || || || || ||
Sbjct 107018 ATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTT 106959
Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAA 563437
|||||| ||||| || || || || || |||| | || | || ||| || || |
Sbjct 106958 ATCTTGGATTTTCGTCTTGACGTTGTCGATAGTGTCAGAG-GACTCCACTTCCAGCGTGA 106900
Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || || |||||||| |||||||| ||||||||
Sbjct 106899 TCGTCTTCCCCGTAAGAGTCTTAACGAATATTTGCAT 106863
Score = 91.5 bits (100), Expect = 1e-12
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||||||||| || | |||||||| || || || ||||||||||| | ||||| |
Sbjct 107537 GAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCG 107478
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
|||||| || || || || ||||| || || | ||||||||| || |||||||| ||
Sbjct 107477 ACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTC 107418
Query 563376 TTTATCTTGAATTTT 563390
|||||||| || ||
Sbjct 107417 CTTATCTTGGATCTT 107403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029265750060280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |