Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq406 116 3e-20 >seq406 Length=409633 Score = 116 bits (128), Expect = 3e-20 Identities = 160/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || ||||| || || || ||||| ||| ||||| |||| ||||| | Sbjct 107309 GAGACGAAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACG 107250 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| || | || |||||||| ||||| || | |||||| || || |||||||| || Sbjct 107249 GCCATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTC 107190 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||||||||| || ||||| ||||| ||||||| | || | | ||| | | Sbjct 107189 CTTATCTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAG-GACTCGACTTCCAACG 107131 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| || || || ||||||||||| |||||||| |||||| Sbjct 107130 TAATCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCATA 107090 Score = 91.5 bits (100), Expect = 1e-12 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 ||| ||||| || |||||||||||||| || | |||||| || || || || || || || Sbjct 107018 ATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTT 106959 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAA 563437 |||||| ||||| || || || || || |||| | || | || ||| || || | Sbjct 106958 ATCTTGGATTTTCGTCTTGACGTTGTCGATAGTGTCAGAG-GACTCCACTTCCAGCGTGA 106900 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || |||||||| |||||||| |||||||| Sbjct 106899 TCGTCTTCCCCGTAAGAGTCTTAACGAATATTTGCAT 106863 Score = 91.5 bits (100), Expect = 1e-12 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || | |||||||| || || || ||||||||||| | ||||| | Sbjct 107537 GAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCG 107478 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| || || || || ||||| || || | ||||||||| || |||||||| || Sbjct 107477 ACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTC 107418 Query 563376 TTTATCTTGAATTTT 563390 |||||||| || || Sbjct 107417 CTTATCTTGGATCTT 107403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029265750060280