Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq406 120 2e-21 >seq406 Length=409633 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || | ||||| || || || || | ||| ||||| | ||||| Sbjct 107540 ACGGAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGT 107481 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || ||||| |||||||| || |||||||| ||||| || |||||||| Sbjct 107480 GCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCC 107421 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||| ||||| ||||| || || || || || || | | | | || || ||| Sbjct 107420 CTCCTTATCTTGGATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTCAACTTCCAA 107361 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | || ||||| |||||||||||||| ||||| || || Sbjct 107360 GG-TGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTG 107322 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||| || || || ||||| || || || |||| ||||| Sbjct 107312 ACGGAGACGAAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGT 107253 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || | |||||||| || ||||| || ||||| || || || |||||||| Sbjct 107252 ACGGCCATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCC 107193 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| ||||||||||| || || ||||| ||||||| | | | || ||| Sbjct 107192 CTCCTTATCTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGACTTCCAA 107133 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || ||||| ||||| || |||||||| || Sbjct 107132 -CGTAATCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTG 107094 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||| |||||||| |||||||| |||||||| || || || || || || ||||| Sbjct 107018 ATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTT 106959 Query 480677 GTCTTGAATCTTTTGT-TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAA 480735 ||||| || ||| || ||||| || ||||| |||| | ||| || || | Sbjct 106958 ATCTTGGAT-TTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGA 106900 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || |||||||||||||| ||||| Sbjct 106899 TCGTCTTCCCCGTAAGAGTCTTAACGAATATTTG 106866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268154664144656