Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq417 89.7 2e-12 seq409 87.8 5e-12 seq283 86.0 2e-11 >seq417 Length=246505 Score = 89.7 bits (98), Expect = 2e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 354023 CACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACGTGCGGCT 354082 ||||||| ||||||||||| | ||| ||||| || ||||| || | || | |||||| | Sbjct 152983 CACCAAGAGAGTCACGGTCCAAGAAGTTAGTCGGCTCGTCCAGAACCAGCAAGTGCGGGT 153042 Query 354083 CCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGA 354131 ||||||| || | || || || ||||||||||||||||| ||||| Sbjct 153043 TGTTCCACATAGCACCGGCGAGCACGACCTTAACCTTCTGTCCTCCTGA 153091 >seq409 Length=410360 Score = 87.8 bits (96), Expect = 5e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | ||| | ||||| | | ||| |||||| | || | || || Sbjct 320466 ATCAGTCCACAGTCGTCACAAATGTGGACACGGAAAGGATCAGAAACATCGAACAGACGC 320525 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| | || ||||| |||||||| || |||||||||||||| |||||| Sbjct 320526 TCCTTCAAGAATGAACTAGCTCCGTGAGAAATCATGCAGTCACGCTCCATTTCTCCGAAA 320585 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTG 251564 || || ||||| |||||||| ||||| || | ||||| Sbjct 320586 CGCAGTCCACCGTCGCGAGCTCTACCTTCCACCGGCTG 320623 >seq283 Length=1466191 Score = 86.0 bits (94), Expect = 2e-11 Identities = 172/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 ||||| |||||||| || | || || || || |||||||| ||||| | | |||| Sbjct 786456 CGCTGGATATAACCGGTCTCGGCAGTCTTGACGGCGGTATCAATAAGACCCTCTCTACCA 786397 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAAC 302714 |||| || |||||||| | ||| || ||| | || | | | ||| |||| || Sbjct 786396 GCCATGGCGTGGAAGAAGAACTCAGTTGG-CGTCAAGCCACGGAGGTACGAGTTCTCGAC 786338 Query 302715 GAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774 |||||||| | ||| || || | ||| |||||| ||||||||||| || | | | Sbjct 786337 AAAACCACGAGACTCTGGGGAGTAGTCATCCTTGGTGAAGTGTGGCAGAGTACGATATTT 786278 Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCATCT 302833 | || | || |||||||| || || || |||||||||| ||| | | |||||| Sbjct 786277 GAATCCAAAAGGAATACGCTTGCCTTCCACAGATTGCTGTCCCA-CCACGGCAGTCATCT 786219 Query 302834 GCGAAATATT 302843 | ||||| || Sbjct 786218 GTGAAATGTT 786209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806813416764