Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq450 132 6e-25 seq416 118 1e-20 seq283 113 6e-19 >seq450 Length=72401 Score = 132 bits (146), Expect = 6e-25 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107 ||||| |||||||||||||||| |||||| | |||||||| | ||||||||||||| Sbjct 37158 ACAGCGTCGGCGGCACGGTGACCTGCGTGATCAGGAACGTGCCCGTCGGCCTCGGCGAGC 37217 Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167 ||||||| || ||| ||||||| ||||| ||||| |||||| |||||||| || | Sbjct 37218 CGTGCTTCGATAAGCTCGAGGCGAAACTCGCGCACGCTATGCTGAGCATCCCGGCAACTA 37277 Query 19168 AGGGATTCGAGATTGGCAGCGGGTTTGCGGG 19198 |||| |||||||| || ||||||| ||| Sbjct 37278 AGGGCTTCGAGATCGGATCTGGGTTTGGGGG 37308 Score = 96.9 bits (106), Expect = 4e-14 Identities = 201/299 (67%), Gaps = 8/299 (3%) Strand=Plus/Plus Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCA 18179 |||||||||||| |||||||| || || |||||| ||| |||| |||||||||| Sbjct 36553 CGTCGGCTGCATAGTCGACGGCTGCCCACCCGGCATGCAACTAACCGAATCCGACATCCA 36612 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 || || || || || ||||| ||||| |||| || | || |||||| |||| Sbjct 36613 ACCCCAAATGACCCGCCGACGACCCGGCCAAAGCGCCCTCACAACCCCGCGCGACGAAAA 36672 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299 || |||||| ||||| || ||||| || |||| |||| || ||| |||| | || Sbjct 36673 AGACCGCGTCGAGATCCATTCCGGCACCGAATTCGGCATCACCCTGGGCACGCCGATTGG 36732 Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAA------ 18353 | | | ||| |||| ||||| || || ||||| || || || | | Sbjct 36733 CATGCTGGTGCGCAACGAGGACCAACGACCAAGGGACTACGGCGGCA-GTACGATGGATC 36791 Query 18354 -GGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCG 18411 | | || ||||| ||||| || || |||||| | | || ||||| |||||||| Sbjct 36792 GGTTTCCCCGGCCGAGTCACGCGGATTATACCTACCTCGAGAAATACGGGGTCAAGGCG 36850 >seq416 Length=244180 Score = 118 bits (130), Expect = 1e-20 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||||||||| |||||| |||| || || | || || ||| |||| |||||| Sbjct 9311 GCTGCCAACTACCTCGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACTGTTGCCAAC 9252 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||| ||||| |||||||| || || ||| || ||| Sbjct 9251 ATGATCAAGGGCAAGTCTCCCGAAGAGATTCGCAAGACGTTCAATATCCAGAACG 9197 >seq283 Length=1466191 Score = 113 bits (124), Expect = 6e-19 Identities = 197/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| || || | ||| |||| |||| |||||||||||||||| || | || || || Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||||||||| | | ||||| ||| | || || | |||| || | ||| Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTGAGACCG 590344 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 ||||| ||||||| ||||||||| | ||||| || | |||||| |||||||| || Sbjct 590343 ATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTTCA 590284 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || |||||||| || || || || || || | ||| | |||| || || Sbjct 590283 ATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTACCA 590224 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352 ||||| || | || |||| || ||||| ||| | | ||||| Sbjct 590223 GCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACAT 590177 Score = 95.1 bits (104), Expect = 1e-13 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||| ||||| || || || || Sbjct 249547 GCCTTCTGGTAATCACCAACACGCTTCTCAAAGAAGTTCGTCTTCCCGGGTAGGGAAATG 249488 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | |||||||| | | | ||||| || | |||||| || || Sbjct 249487 TTGTCCATGAAATCAAACGGGTTCTGGGCATGGTAGTATTTGCCATTTCCGAGAGAAACG 249428 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || ||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||| Sbjct 249427 AGGAGGCGATCGGCGACGAATTCGATGTATTGGCACATGAGTCTGGCGTTCATACCGAGA 249368 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || || | || ||| || || | |||||| ||| ||||| |||| Sbjct 249367 AGTGCGACGGGAAGGGCATCCGTCAGGAATTCCTGCTCGATGGTGACAGCCTCCGTGATG 249308 Query 868931 AT 868932 || Sbjct 249307 AT 249306 Score = 91.5 bits (100), Expect = 2e-12 Identities = 166/238 (70%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 733077 CGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGC 733136 |||| ||||| | |||||||| | || || |||||||||||||||||| ||||||| Sbjct 494307 CGCCGTCCCGAAGTCGGCGACAAGTTCTCCTCCCGCCACGGCCAAAAGGGCGTCGTGGGC 494248 Query 733137 AGCGTG-CGCTCCACCGAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACAT 733195 | | || || ||| |||||||||| || ||| | ||| ||| || ||||| Sbjct 494247 ATCATGACGGACCA-ATCTGACATGCCCT--TCTCCG-ACCAAGGCATCACCCCAGACAT 494192 Query 733196 CGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCT 733255 | | || ||||| |||| |||| || || ||||| | ||||||||||||||| | | Sbjct 494191 CATCATGAACCCCCACGGTTTCCCCTCCCGGATGACAGTCGGCAAGATGCTCGAGCTCGT 494132 Query 733256 CCTGGGCAAGGTGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTTTGGCGGC 733313 | ||||| | | | || | ||| | |||| ||||||| ||| |||||| Sbjct 494131 CGCCGGCAAAGCCGGCGTCCTCTCCGGCCAACACGGCTACGGCACCTGCTTCGGCGGC 494074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107092259001324