Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq406 105 6e-18 seq394 82.4 7e-11 >seq406 Length=409633 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| ||||| || || | ||||| || | || Sbjct 107319 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAGAGCTCC 107378 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||||||||||| || || ||||| || || ||||| Sbjct 107379 GACACCATCGATAACGTGAAGAC-CAAGATCCAAGATAAGGAGGGAATTCCACCGGATCA 107437 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| | |||||||| || || |||||||| ||| | | | || ||||| || Sbjct 107438 GCAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACAA 107497 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || |||||||| Sbjct 107498 TATCCAGAAGGAGAGCACCCTTCACTTGGT 107527 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786 || || || || || || || || || ||| ||| |||||| | || |||| ||| || Sbjct 106370 ACTGGGAAGACCATCACTCTAGAGGTCGAATCCAGCGACACCATCGACAACGTTAAGACC 106429 Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 || |||||| ||||| || || || ||||| || || || ||||||||||| || || || Sbjct 106430 AA-GATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGTTTGATCTTCGCTGGAAA 106488 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| | | | |||| || ||||||||||| ||||| || || || || Sbjct 106489 GCAGCTTGAGGACGGTCGTACCCTGTCCGACTATAACATTCAGAAGGAGTCTACTCTCCA 106548 Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930 | | || | || |||| || || Sbjct 106549 CCTTGTCCTCCGTCTGCGTGGCGG 106572 >seq394 Length=603486 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || || ||||| || ||||| ||||| || || | | |||||| | || ||| Sbjct 13878 AAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATCGACAAC 13819 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | || || || |||||| ||||| || || || || || || || || ||||||||||| Sbjct 13818 GTCAAGACCAA-GATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTTTGATCTT 13760 Query 24838 TGCCGGGAAACAGCTGGAGGAT 24859 || || || ||||| |||||| Sbjct 13759 CGCTGGTAAGCAGCTCGAGGAT 13738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894383232160