Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq406 134 3e-26 >seq406 Length=409633 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || || || |||||||| || || || |||| Sbjct 107319 TACCACCACGGAGACGAAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAG 107260 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || | || ||||| || || || || | ||| || ||||| | Sbjct 107259 AAAGAGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCG 107200 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||||||||||||||| | ||||| || ||||| |||||| | || | Sbjct 107199 GAATTCCCTCCTTATCTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGA 107140 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || |||||||| || || | || || || || |||||||| Sbjct 107139 CTTCCAACGTAATCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 132 bits (146), Expect = 9e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| ||||| || || || ||||| ||||| ||||| || ||| | | ||| Sbjct 107534 ACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACC 107475 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || || || ||||||||||| || | ||| ||||| || || ||||| ||||| Sbjct 107474 ATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTT 107415 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 |||||| ||||| | || || || || || || || || | || |||||||| || | Sbjct 107414 ATCTTGGATCTTGGTCTTCACGTTATCGATGGTGTC-GGAGCTCTCAACTTCCAAGGTGA 107356 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || | ||||| || || |||||||| Sbjct 107355 TCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Score = 105 bits (116), Expect = 1e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | ||| || || || || ||||| || || || || || || | | || Sbjct 107077 CGAAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCA 107018 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||| ||||| || || | ||| || ||||| || || || |||||| Sbjct 107017 TCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTA 106958 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| || || | || || || || || || ||| | || ||||||| || ||| Sbjct 106957 TCTTGGATTTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATC 106898 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || || | ||||| || ||||| |||||| Sbjct 106897 GTCTTCCCCGTAAGAGTCTTAACGAATATTTGCATT 106862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981820004433908