Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq406 125 7e-24 seq394 102 8e-17 seq403 84.2 2e-11 >seq406 Length=409633 Score = 125 bits (138), Expect = 7e-24 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||||||| || || | | | |||||||| |||||||| Sbjct 106831 GTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTACGGCCA-TCCTCGAGTTGCTTGCC 106773 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || || ||||||||||| || ||||| |||||||| ||||| ||| Sbjct 106772 TGCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGTCTT 106713 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| ||| |||||| || | ||||| ||| ||||| || || || Sbjct 106712 GACATTGTCGATCGTGTCACTGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTAAGGGT 106653 Query 133643 TTTTACGA 133650 || |||| Sbjct 106652 CTTGACGA 106645 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||| ||| ||||| ||||||||||| | ||| ||| | || || || Sbjct 107524 AAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCA-TCTTCCAG 107466 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | ||||| || ||||| || || || || || ||||| || ||| Sbjct 107465 CTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTTATCTTGGAT 107406 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||||| | ||| || || | ||||| ||||| || Sbjct 107405 CTTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTCAACTTCCAAGGTGATCGTTTTTCC 107346 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || ||||| |||||||| Sbjct 107345 GGTGAGAGTCTTGACGAAGATCTGCAT 107319 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||| || | || | | | ||||| | |||||| || Sbjct 107287 GTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCA-TCCTCCAACTGCTTTCC 107229 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || || |||||||| || || || || ||||| || ||||| ||| Sbjct 107228 GGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATCTTGAATCTTCGTCTT 107169 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| || || | || ||| || || | || | || || ||||| ||||| Sbjct 107168 TACGTTGTCAATGGTATCAGAGGACTCGACTTCCAACGTAATCGTCTTTCCGGTAAGAGT 107109 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 107108 TTTCACGAAAATCTGCAT 107091 >seq394 Length=603486 Score = 102 bits (112), Expect = 8e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || || | | | |||||||||||||| || ||| | || Sbjct 13706 TTCTGGATGTTGTAGTCGCTCAAGGTACGGCCA-TCCTCGAGCTGCTTACCAGCGAAGAT 13764 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 | ||||||||||| || ||||| || |||||||| |||||| ||||| | || Sbjct 13765 CAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 13824 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || ||||| || || ||||| Sbjct 13825 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 13884 >seq403 Length=471098 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | |||| ||| ||||||||||||||| || Sbjct 10644 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCGAGCTGCTTTCC 10702 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 ||| | || | |||||||||||||| ||||| || |||||||| || Sbjct 10703 GGCGAAGATCAAACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCTGT 10750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417343541280