Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq406 91.5 1e-13 seq403 86.0 4e-12 >seq406 Length=409633 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || || | || |||||| |||||| || |||||||||||||| Sbjct 106861 CCACCACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 106802 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | ||| || || || ||||||| ||| ||||| || | || Sbjct 106801 AGAGTACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGA 106742 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||| ||| || | |||| ||| | ||||| || || ||||| Sbjct 106741 ATGCCCTCCTTGTCCTGAATCTTC-GTCTTGACATTGTCGATCGTGTCACTGGACTCCAC 106683 Query 33702 GTCAACCGTGATCGTTTTACCTGT 33725 |||| ||||| || || || || Sbjct 106682 CTCAAGGGTGATGGTCTTGCCAGT 106659 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| ||||||||||| || | || || | || Sbjct 107065 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGC 107006 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||||||||| | ||| ||||| ||| |||| | || || || || |||||| Sbjct 107005 TTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATCTTGGATTTTC 106946 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | || | ||| | ||||| || ||||| || | ||||||||| || || || Sbjct 106945 -GTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTTCCCCGT 106887 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || || || ||||| Sbjct 106886 AAGAGTCTTAACGAATATTTGCAT 106863 >seq403 Length=471098 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || || ||| || || |||||||| ||||| Sbjct 10613 ACCACCACGAAGACGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 10672 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || |||||||| || |||||||||||||| || |||| Sbjct 10673 GAGCGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGG 10732 Query 33642 CACACCTTCTTTGTC 33656 | ||| || ||||| Sbjct 10733 GATACCCTCCTTGTC 10747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701708522240