Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq406 129 1e-24 >seq406 Length=409633 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || ||||| ||||| || |||||||| || ||||| || | || Sbjct 107106 AAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCTGATACCATTGACAAC 107165 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||||||||| || || |||||| ||| ||| ||| | || || ||| Sbjct 107166 GTAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACCAGCAACGCCTGATTTTC 107225 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||||||||| ||||| | ||| | | || |||||| | ||||||||||| Sbjct 107226 GCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACAACATTCAGAAAGAGTCC 107285 Query 206365 ACTCTTCACCTTGT 206378 || || |||||||| Sbjct 107286 ACGCTCCACCTTGT 107299 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| |||||||||||||| |||||||| || || || ||| Sbjct 107322 CAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAGAGCTCCGAC 107381 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || |||||| ||||| ||| Sbjct 107382 ACCATCGATAACGTGAAGACCAAGATCCAAGATAAGGAGGGAATTCCACCGGATCAGCAA 107441 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || |||||| |||||||||| | ||| | | |||||||| || Sbjct 107442 CGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACAATATC 107501 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||| || |||||| | ||| Sbjct 107502 CAGAAGGAGAGCACCCTTCACTTGGTT 107528 Score = 111 bits (122), Expect = 4e-19 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTC--TGACACAGTCGAA 206241 ||| || || || || || || ||||| | || ||||| || | |||||| |||| Sbjct 106649 CAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGA--GTCCAGTGACACGATCGAC 106706 Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 || ||| |||||||| || || || || ||| || ||| ||| | || || Sbjct 106707 AATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTGATT 106766 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 ||||| || ||||| | || ||||| | ||| || ||||||||||| ||||||||||| Sbjct 106767 TTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAAGAG 106826 Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||||||||||| ||| | ||||| Sbjct 106827 TCCACTCTTCACCTTGTCTTGCGTCTTCG 106855 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || |||||||| |||||||||| |||||||| |||| Sbjct 106878 AAGACTCTTACGGGGAAGACGATCACGCTGGAAGTGGAGTCCTCTGACACTATCGACAAC 106937 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||||| || || || || ||| ||| ||| | || || || Sbjct 106938 GTCAAGACGAAAATCCAAGATAAGGAGGGGATCCCGCCAGACCAGCAACGTCTCATTTTT 106997 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || ||||| | || | |||| |||||| ||||||| ||||| Sbjct 106998 GCCGGAAAGCAGCTTGAGGATGGCCGTACACTCTCCGACTACAACATCCAGAAGGAGTCC 107057 Query 206365 ACTCTTCACCTTGTT 206379 || || ||||||||| Sbjct 107058 ACACTCCACCTTGTT 107072 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | ||| |||||||||||||| ||||||||||||| || || || | || ||| Sbjct 106855 CGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTA 106796 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| || || ||||| || ||||| || || ||||| || Sbjct 106795 CGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTG 106752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181812138730812