Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq283 131 2e-24 >seq283 Length=1466191 Score = 131 bits (144), Expect = 2e-24 Identities = 205/291 (70%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGC-- 259952 ||||| ||| ||| ||||| || |||| || | ||||| || || || |||| Sbjct 590177 ATGTCTCAGAAGTACTTCACACATGCTTCGCCGACATTATTTAACGCTGGTACTCCGCAG 590236 Query 259953 GCCCGCAGAATTCG--TCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCAT 260010 |||| |||| | || || || ||| | || |||||||| ||| || || ||||| Sbjct 590237 GCCC----AATTAGCCTCTTGTTTCCTGGTCGATATGAAGGCGGATAGCATTGAAGGCAT 590292 Query 260011 CTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGC 260070 |||||||||| | ||| ||||| | ||||||||| ||||||| ||||||||| | Sbjct 590293 CTATGACACGTTAAAGACTTGCGCAATGATCTCCAAGACGGCCGGTGGCATCGGTCTCAA 590352 Query 260071 CGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGG 260130 || |||| | || || | ||| ||||| | | ||||||||||| || || || Sbjct 590353 CGTCCACAGAATTCGTGCTACAGGCTCCTACATCGGTGGCACCAACGGTTCTTCTAATGG 590412 Query 260131 CCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 |||| |||||||| ||||| | |||| |||| ||| | || || ||||| Sbjct 590413 AATTGTCCCCATGCTCCGCGTCTATAACAACACTGCGAGGTATGTAGACCA 590463 Score = 125 bits (138), Expect = 1e-22 Identities = 214/303 (71%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| | |||| | || || ||||| ||||| ||||| ||| ||||| Sbjct 248638 GATCTGGCAAATGTACAAGAAAG-CAGAAGCATCCTTCTGGACTGCCGAAGAGATCGACT 248696 Query 1455835 T--CGGCG--CCGACACGGTCCACTGGG-TGTCGCT--GAGCGACGACGAGCGCCATTTC 1455887 | || | || |||| ||||| || | | || ||| ||||||||| | ||| Sbjct 248697 TGTCGAAGGACCTCCACG----ACTGGCATGACCGTTTGAACGATGACGAGCGCTACTTC 248752 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| | ||||| || ||| ||||| || || ||||| ||| ||||||| ||| Sbjct 248753 ATCTCTCGTGTCCTTGC-TTTCTTCGCTGCATCTGACGGCATTGTGAACGAGAACTTGGT 248811 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | ||||| | |||||||| | || || || |||| || ||||| ||||| || Sbjct 248812 GGAGCGCTTCAGCGGCGAGGTCCAGATTCCCGAAGCTCGTTGCTTCTACGGCTTCCAAAT 248871 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || ||||||||||| || |||||||| ||||| || ||||| || |||||||| Sbjct 248872 TATGATTGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACTTATGTCAAGGA 248931 Query 1456068 CCC 1456070 || Sbjct 248932 GCC 248934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177756029548664