Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq283 161 1e-34 >seq283 Length=1466191 Score = 161 bits (178), Expect = 1e-34 Identities = 576/895 (64%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || ||||| || ||||||| |||| ||||| || || ||||| | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | || ||| ||||||||||| | || ||| |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 | ||| | | |||| ||| || || || || || ||| || | ||||| | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | ||| || |||||||| || | ||| || || | | || || || ||||| ||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || |||| || || |||||||| |||||||| | ||||| || | ||| |||||||| Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||| || || ||| || || ||| | || ||||| | | ||||| Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTGAGACCG 590344 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || ||| | || ||||| | || ||| || || |||||||| || || || Sbjct 590343 ATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTTCA 590284 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 |||||||| | |||| | | || ||||| | | ||| || ||| || Sbjct 590283 ATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTACCA 590224 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || ||||||||||| || || || || ||||| | || | ||| | || | || ||| Sbjct 590223 GCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAGTT 590164 Query 70057 TCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115 || || ||| ||| || || ||| | || || || | || || ||||||| ||| || Sbjct 590163 TCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATGTG 590105 Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175 || || ||||| | || ||| || | |||||||| || || || || Sbjct 590104 TTGTGGACGTTCCGCAACCTTCCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTCTT 590045 Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 ||| || || |||| || ||||| | || || | ||| |||| || |||| | | Sbjct 590044 AAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTCACC 589985 Query 70236 CTTATATTTGGTAACTATATCCATAACAGT-AGGTGAGATAATCGGAGATCGTTTACCAT 70294 | || ||| | || || | | ||| | | || || || || | | || | || Sbjct 589984 CGCATGTTTCATGACAAT-TTCGTAAGTTTGATCCGATATCATAGGTGCTGCTTGATTAT 589926 Query 70295 TTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTT 70354 | || ||||||||| ||| ||||||| || || |||| | || || |||| Sbjct 589925 TCTTCGGATTAACAAAGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTTCGTTT 589866 Query 70355 CCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 |||||| | || || | ||| || | ||| || || || || ||||| || || Sbjct 589865 GCTTGTGAAGGTTGGAAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 104 bits (114), Expect = 3e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 |||||||| || || || || ||||| ||||| ||||| || ||||| || || | || Sbjct 249211 TCGTTAGAGAAGGTAAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCG 249152 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCT 39770 ||||| |||||||||||||| || || || |||||||| |||||||||| || Sbjct 249151 AAAGACCCAGAAAAGAAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCT 249100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903888602080