Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq283 104 2e-17 seq394 91.5 1e-13 >seq283 Length=1466191 Score = 104 bits (114), Expect = 2e-17 Identities = 281/423 (66%), Gaps = 13/423 (3%) Strand=Plus/Minus Query 131609 TCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCC 131668 ||| | ||||| | || | ||| | |||||| ||||| || ||||||||||| || Sbjct 590664 TCGTTCGGACAGAAAAGGGTCCAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCT 590605 Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTT---TTTCTCTTCTGTACCCATAAtt 131725 || ||| | ||||| |||| ||| | |||| | || ||||| || || | || Sbjct 590604 GGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTAACTTCCTCTT-TG---CCGTGGTT 590549 Query 131726 tttttCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCAT 131784 || || | || || || |||| || | ||||| || |||||||| | || | Sbjct 590548 CTTGCGAAGGTCCAAGAACTCAAAAACATCGGAGTGCCATGGCTCCAAATAGATGGCAAA 590489 Query 131785 TGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCG 131841 || ||| |||| ||||| ||||| | |||| | | ||||||| || ||||| Sbjct 590488 AGCACCTGGGCGCTTATTACCTCCTTGGTCTACATACCTCGCAGTGTTGTTATAGACGCG 590429 Query 131842 CAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGC 131901 | |||||| | | || || | || ||||||| |||||| ||| | || Sbjct 590428 GAGCATGGGGACAATTCCATTAGAAGAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGC 590369 Query 131902 TCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATT 131960 | ||| |||| |||||||| || || || || ||||| || ||||| | |||||| Sbjct 590368 ACGAATTCTGTGGACGTTGAGACCGATGCCACCGGCCGT-CTTGGAGATCATTGCGCAAG 590310 Query 131961 TGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAG 132020 | ||| |||| |||||| ||||| | ||| ||||| || ||||| | || |||| Sbjct 590309 TCTTTAACGTGTCATAGATGCCTTCAATGCTATCCGCCTTCATATCGACCAGGAAACAAG 590250 Query 132021 AGG 132023 ||| Sbjct 590249 AGG 590247 >seq394 Length=603486 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || ||||||||||||| | | || | || |||||||| ||||| ||| | || Sbjct 13706 TTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 13765 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 | |||||| || ||||| || | |||||| || || ||||||| | || | | | || Sbjct 13766 AAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 13825 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239 | ||||| | | ||||| || || || || | || |||||||| || || || ||| Sbjct 13826 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAG 13885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931437676064