Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq283 127 2e-24 seq417 89.7 6e-13 >seq283 Length=1466191 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| ||| ||||||| | || ||||| |||||||||||||||||| ||||| || | Sbjct 249091 CCTTCGCTCAGCGACTTGTTGCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTT 249150 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | || | ||||| |||||||| ||||| |||||||| || |||||| |||| Sbjct 249151 TCGCATCGATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCAGGCCTTACCTTCTCTAACG 249210 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||||| |||||||| || |||||| || ||||| Sbjct 249211 AGCTGATCTCGCGTGACGAAGGTCTCCACACTGACTTTGC 249250 Score = 116 bits (128), Expect = 4e-21 Identities = 405/622 (65%), Gaps = 19/622 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| ||||| | ||||| || ||| | || || || || ||||||||||| | | Sbjct 590099 CCACAACACATGCTGATGCGGGTTGCCGTTGGCATACACGGTGAAGACATTGAAAAAGCC 590158 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || || || || |||||| || | ||| |||| || || | || || | || Sbjct 590159 ATCGAAACTTATCACTTGATGTCTCAGAAGTAC-TTCACACATGCTTCGCCGACATTATT 590217 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || |||||||| || ||||| | || ||| ||||| ||| | |||| ||| Sbjct 590218 TAACGCTGGTACTCCGCAGGCCCAATTAGCCTCTTGTTTCCTGGTCGATATGAAGGCGGA 590277 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCT 104458 || | || ||||||| || ||| || | ||||||| ||||| ||| ||| Sbjct 590278 TAGCATTGAAGGCATCTATGACACG-TTAAAGACT-TGCGCAATGATCTCCAAGACGGCC 590335 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || || || || | || |||| | | || | | ||| || |||| || | Sbjct 590336 GGTGGCATCGGTCTCAACGTCCACAGAATTCGTGCTAC--AGGCTCCTACATCGGTGGCA 590393 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| || |||| ||| | || ||||| ||||| | |||| ||| ||| | | Sbjct 590394 CCAACGGTTCTTCTAATGGAATTGTCCCCATGCTCCGCGTCTATAACAACACTGCGAGGT 590453 Query 104577 ATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630 ||||| | |||| || ||| | | || || | || ||||| | ||||||| Sbjct 590454 ATGTAGACCAAGGAGGTAATAAGCGCCCA---GGTGCTTTTGCCATCTATTTGGAGCCAT 590510 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 ||||| | ||| | | |||||| | || | || ||||| || | ||||| | Sbjct 590511 GGCACTCCGATGTTTTTGAGTTCTTGGACCTTCGCAAGAACCACGGCAAAGAGGAAGTTA 590570 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | || ||| | |||| ||||||||||| |||||| | || ||||| | |||||| Sbjct 590571 GAGCTCGTGATTTGTTCTACGCTCTCTGGACTCCAGACTTGTTTATGAAACGCGTTGAGT 590630 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 || || ||||| | || || ||||| || ||||||||||| | | |||| | Sbjct 590631 CGAACGGTGATTGGACCCTTTTCTGTCCGAACGAGGCACCTGGTTTGGCAGATGTTTACG 590690 Query 104811 GTGAGGAGTTTGAAGCCCTTTA 104832 | || |||||||| || ||||| Sbjct 590691 GCGATGAGTTTGAGGCTCTTTA 590712 >seq417 Length=246505 Score = 89.7 bits (98), Expect = 6e-13 Identities = 219/327 (67%), Gaps = 19/327 (6%) Strand=Plus/Plus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672 |||||| |||||||| || | || ||||| | || ||||| |||||||| | Sbjct 227076 AAAACCGTCCATCTCGGTAAGAATCTGGTTGAGTGTACTCTCCCGCTCATCATTACC--- 227132 Query 9673 CATACCACCAGCAC--TGCGTTGC-------TTTCCCACGGCATCAATCTCATCAATGAA 9723 ||||||| || ||| | || || || | ||| || || ||||||||||| Sbjct 227133 ---ACCACCAAAACCTTGCTTGGCACGAGATTTACCGATGGCGTCGATTTCATCAATGAA 227189 Query 9724 GACGATGCATGG-TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGC 9782 ||| ||||| || || | ||| | ||| | ||||| || |||||||| || | Sbjct 227190 GACTATGCACGGCGTGTTCTTC-CTGGCGTTGGCGAAGAGGTCACGTACACGAGAGGGAC 227248 Query 9783 CCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTA 9841 | ||||| || |||||||| || || | | || ||| | || ||||||||| | Sbjct 227249 CGACACCGACGAACATCTCAACGAACTCAGAACCGCTAACGCT-GAAGAAGGGGACCGCA 227307 Query 9842 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9901 |||||||| ||| | || ||||| | |||||||| ||||| || || | || Sbjct 227308 GATTCACCAGCAGTTGCCTTCGCGAGCAACGTCTTACCAGTACCAGGAGATCCTGATAGA 227367 Query 9902 AGGGCACCTCGTGGAATCTTGGCGCCA 9928 | ||||| || || |||||||| ||| Sbjct 227368 ATCGCACCGCGAGGGATCTTGGCACCA 227394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256629685280