Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq283 131 2e-25 >seq283 Length=1466191 Score = 131 bits (144), Expect = 2e-25 Identities = 381/587 (65%), Gaps = 0/587 (0%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || || ||||| || || || ||| | || | ||| || || || Sbjct 590114 ATGCGGGTTGCCGTTGGCATACACGGTGAAGACATTGAAAAAGCCATCGAAACTTATCAC 590173 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 ||||| ||||||| |||||| || || ||||||| | || ||||| ||||| Sbjct 590174 TTGATGTCTCAGAAGTACTTCACACATGCTTCGCCGACATTATTTAACGCTGGTACTCCG 590233 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 | | || | | |||||||| || | |||||||| || |||||||| |||||| Sbjct 590234 CAGGCCCAATTAGCCTCTTGTTTCCTGGTCGATATGAAGGCGGATAGCATTGAAGGCATC 590293 Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357 || || ||| | ||| ||||| ||||||||| | |||| || ||||| || || Sbjct 590294 TATGACACGTTAAAGACTTGCGCAATGATCTCCAAGACGGCCGGTGGCATCGGTCTCAAC 590353 Query 19358 TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGT 19417 | | || || | | || | ||| ||| || ||||| | | || Sbjct 590354 GTCCACAGAATTCGTGCTACAGGCTCCTACATCGGTGGCACCAACGGTTCTTCTAATGGA 590413 Query 19418 ATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGC 19477 || ||||| ||||||||||||| |||||||| || ||||| || |||| || || Sbjct 590414 ATTGTCCCCATGCTCCGCGTCTATAACAACACTGCGAGGTATGTAGACCAAGGAGGTAAT 590473 Query 19478 AAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTC 19537 || ||| || | || |||||||| | |||||||||||| | || || | || ||| Sbjct 590474 AAGCGCCCAGGTGCTTTTGCCATCTATTTGGAGCCATGGCACTCCGATGTTTTTGAGTTC 590533 Query 19538 CTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCC 19597 | || || ||| |||||| || | ||||| | | ||| || | ||| || Sbjct 590534 TTGGACCTTCGCAAGAACCACGGCAAAGAGGAAGTTAGAGCTCGTGATTTGTTCTACGCT 590593 Query 19598 TTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATG 19657 | |||| ||| ||| | || ||| | |||||| | ||| || ||| ||| | Sbjct 590594 CTCTGGACTCCAGACTTGTTTATGAAACGCGTTGAGTCGAACGGTGATTGGACCCTTTTC 590653 Query 19658 TGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704 || ||| |||| ||||| | | || || |||||||| | ||| Sbjct 590654 TGTCCGAACGAGGCACCTGGTTTGGCAGATGTTTACGGCGATGAGTT 590700 Score = 102 bits (112), Expect = 9e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || || | |||||||||||| ||||| |||||| |||||||||| | |||||||| Sbjct 591881 GTGCGGAGATAGTACATGCCAGTCTTCAGACCCATCTTCCATCCAGCAAAATGCATACTG 591822 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | | |||| ||| | || | | |||| |||||||| |||||||||||||| || Sbjct 591821 GTAATCTTGCCCATGGTGGGCTCTTTCATGTGAATGTTGAGAGACTGGGACTGGTCAATA 591762 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 ||||| || ||||| || ||||| | | || |||| ||||||||| | |||| Sbjct 591761 TACGCGCCACGGTCTGCAGCCATCTGCAGGATATTACGCTGCGAAATCTCCCACACGGTC 591702 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGAT 78398 ||| | |||| || ||| | |||| Sbjct 591701 TTGTAGAGAACCTTAAGTTCTGTCGGGAT 591673 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || || || || | || |||||| || || || |||||||| ||||| || ||| Sbjct 249093 TTCGCTCAGCGACTTGTTGCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTTTC 249152 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | || |||||||| || ||||| || || ||||| ||||| | ||||| |||||| Sbjct 249153 GCATCGATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCAGGCCTTACCTTCTCTAACGAG 249212 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||| || || ||||| || ||||| Sbjct 249213 CTGATCTCGCGTGACGAAGGTCTCCA 249238 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 20604 ATATCCCC-CAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGC 20662 ||||||| |||||| | |||| | |||| |||||| ||||| || | ||| | Sbjct 591671 ATATCCCGACAGAACTT-AAGGTTCTCTACAAGACCGTGTGGGAGATTTCGCAGCGTAAT 591729 Query 20663 ATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTC 20722 ||| | | ||||| || || || ||||| || || |||||||||||||| ||||| | Sbjct 591730 ATCCTGCAGATGGCTGCAGACCGTGGCGCGTATATTGACCAGTCCCAGTCTCTCAACATT 591789 Query 20723 TTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAG 20782 |||| | | || | | ||| ||| | | | |||||| | || ||| | | | Sbjct 591790 CACATGAAAGAGCCCACCATGGGCAAGATTACCAGTATGCATTTTGCTGGATGGAAGATG 591849 Query 20783 GGGCTCAAGACGGGCATGTACTATCTGCGGAC 20814 || || ||||| |||||||||||||| || || Sbjct 591850 GGTCTGAAGACTGGCATGTACTATCTCCGCAC 591881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520878047680