Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05]
572 sequences; 22,032,815 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq283 131 2e-25
>seq283
Length=1466191
Score = 131 bits (144), Expect = 2e-25
Identities = 381/587 (65%), Gaps = 0/587 (0%)
Strand=Plus/Plus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| || || || ||||| || || || ||| | || | ||| || || ||
Sbjct 590114 ATGCGGGTTGCCGTTGGCATACACGGTGAAGACATTGAAAAAGCCATCGAAACTTATCAC 590173
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
||||| ||||||| |||||| || || ||||||| | || ||||| |||||
Sbjct 590174 TTGATGTCTCAGAAGTACTTCACACATGCTTCGCCGACATTATTTAACGCTGGTACTCCG 590233
Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297
| | || | | |||||||| || | |||||||| || |||||||| ||||||
Sbjct 590234 CAGGCCCAATTAGCCTCTTGTTTCCTGGTCGATATGAAGGCGGATAGCATTGAAGGCATC 590293
Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357
|| || ||| | ||| ||||| ||||||||| | |||| || ||||| || ||
Sbjct 590294 TATGACACGTTAAAGACTTGCGCAATGATCTCCAAGACGGCCGGTGGCATCGGTCTCAAC 590353
Query 19358 TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGT 19417
| | || || | | || | ||| ||| || ||||| | | ||
Sbjct 590354 GTCCACAGAATTCGTGCTACAGGCTCCTACATCGGTGGCACCAACGGTTCTTCTAATGGA 590413
Query 19418 ATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGC 19477
|| ||||| ||||||||||||| |||||||| || ||||| || |||| || ||
Sbjct 590414 ATTGTCCCCATGCTCCGCGTCTATAACAACACTGCGAGGTATGTAGACCAAGGAGGTAAT 590473
Query 19478 AAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTC 19537
|| ||| || | || |||||||| | |||||||||||| | || || | || |||
Sbjct 590474 AAGCGCCCAGGTGCTTTTGCCATCTATTTGGAGCCATGGCACTCCGATGTTTTTGAGTTC 590533
Query 19538 CTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCC 19597
| || || ||| |||||| || | ||||| | | ||| || | ||| ||
Sbjct 590534 TTGGACCTTCGCAAGAACCACGGCAAAGAGGAAGTTAGAGCTCGTGATTTGTTCTACGCT 590593
Query 19598 TTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATG 19657
| |||| ||| ||| | || ||| | |||||| | ||| || ||| ||| |
Sbjct 590594 CTCTGGACTCCAGACTTGTTTATGAAACGCGTTGAGTCGAACGGTGATTGGACCCTTTTC 590653
Query 19658 TGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704
|| ||| |||| ||||| | | || || |||||||| | |||
Sbjct 590654 TGTCCGAACGAGGCACCTGGTTTGGCAGATGTTTACGGCGATGAGTT 590700
Score = 102 bits (112), Expect = 9e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|| || | |||||||||||| ||||| |||||| |||||||||| | ||||||||
Sbjct 591881 GTGCGGAGATAGTACATGCCAGTCTTCAGACCCATCTTCCATCCAGCAAAATGCATACTG 591822
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| | |||| ||| | || | | |||| |||||||| |||||||||||||| ||
Sbjct 591821 GTAATCTTGCCCATGGTGGGCTCTTTCATGTGAATGTTGAGAGACTGGGACTGGTCAATA 591762
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
||||| || ||||| || ||||| | | || |||| ||||||||| | ||||
Sbjct 591761 TACGCGCCACGGTCTGCAGCCATCTGCAGGATATTACGCTGCGAAATCTCCCACACGGTC 591702
Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGAT 78398
||| | |||| || ||| | ||||
Sbjct 591701 TTGTAGAGAACCTTAAGTTCTGTCGGGAT 591673
Score = 93.3 bits (102), Expect = 5e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
|| || || || || | || |||||| || || || |||||||| ||||| || |||
Sbjct 249093 TTCGCTCAGCGACTTGTTGCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTTTC 249152
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| || |||||||| || ||||| || || ||||| ||||| | ||||| ||||||
Sbjct 249153 GCATCGATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCAGGCCTTACCTTCTCTAACGAG 249212
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118
||||| || || ||||| || |||||
Sbjct 249213 CTGATCTCGCGTGACGAAGGTCTCCA 249238
Score = 82.4 bits (90), Expect = 8e-11
Identities = 147/212 (69%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 20604 ATATCCCC-CAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGC 20662
||||||| |||||| | |||| | |||| |||||| ||||| || | ||| |
Sbjct 591671 ATATCCCGACAGAACTT-AAGGTTCTCTACAAGACCGTGTGGGAGATTTCGCAGCGTAAT 591729
Query 20663 ATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTC 20722
||| | | ||||| || || || ||||| || || |||||||||||||| ||||| |
Sbjct 591730 ATCCTGCAGATGGCTGCAGACCGTGGCGCGTATATTGACCAGTCCCAGTCTCTCAACATT 591789
Query 20723 TTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAG 20782
|||| | | || | | ||| ||| | | | |||||| | || ||| | | |
Sbjct 591790 CACATGAAAGAGCCCACCATGGGCAAGATTACCAGTATGCATTTTGCTGGATGGAAGATG 591849
Query 20783 GGGCTCAAGACGGGCATGTACTATCTGCGGAC 20814
|| || ||||| |||||||||||||| || ||
Sbjct 591850 GGTCTGAAGACTGGCATGTACTATCTCCGCAC 591881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548520878047680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |