Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq283 122 1e-22 >seq283 Length=1466191 Score = 122 bits (134), Expect = 1e-22 Identities = 353/535 (66%), Gaps = 10/535 (2%) Strand=Plus/Plus Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 |||| ||| || |||||||| || || || |||| || | || ||||||||||| Sbjct 590172 ACTTGATGTCTCAGAAGTACTTCACACATGCTTCGCCGACATTATTTAACGCTGGTACTC 590231 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | || | | || |||||||| | ||||||| || || || |||| Sbjct 590232 CGCAGGCCCAATTAGCCTCTTGTTTCCTGGTCGATATGAAGGCGGATAGCATTGAAGGCA 590291 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 |||| || ||| | ||| || || ||||||||| | | ||||| |||||| || Sbjct 590292 TCTATGACACGTTAAAGACTTGCGCAATGATCTCCAAGACGGCCGGTGGCATCGGTCTCA 590351 Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | | | ||| | ||||| | ||| | ||| || || ||||| | | Sbjct 590352 ACGTCCACAGAA--TTCGTGCTACAGGCTCCTACATCGGTGGCACCAACGGTTCTTCTAA 590409 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 |||||| || || ||||||||||||| |||||||| || |||| || |||| || || Sbjct 590410 TGGAATTGTCCCCATGCTCCGCGTCTATAACAACACTGCGAGGTATGTAGACCAAGGAGG 590469 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | |||||| || | || |||||||| | ||||| |||||| |||| || | || Sbjct 590470 TAATAAGCGCCCAGGTGCTTTTGCCATCTATTTGGAGCCATGGCACTCCGATGTTTTTGA 590529 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTT- 53667 ||| | || || || ||| || || | || || | | ||| ||||| |||| Sbjct 590530 GTTCTTGGACCTTCGCAAGAACCACGGCAAAGAGGAAGTTAGAGCT--CGTGATTTGTTC 590587 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727 ||| ||||| |||| ||| ||| | || ||| || || ||| | ||| || ||| Sbjct 590588 TAC-GCTCTCTGGACTCCAGACTTGTTTATGAAACGCGTTGAGTCGAACGGTGATTGGAC 590646 Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 ||| | || ||||||||| || || | | ||| ||||| || |||||| Sbjct 590647 CCTTTTCTGTCCGAACGAGGCACCTGGTTTGGCAGATGTTTACGGCGATGAGTTT 590701 Score = 98.7 bits (108), Expect = 1e-15 Identities = 304/466 (65%), Gaps = 6/466 (1%) Strand=Plus/Minus Query 117150 ACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGA 117209 |||| || |||||||| || |||||||| | || |||||| || || ||||| || || | Sbjct 333579 ACCCCGTACCGATACCGTCGGCACCATTGACCAAAATCATAGGGACCACAGGCACATAAA 333520 Query 117210 ACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCG 117269 | ||||| | | |||||| ||| | ||| | || | || | || | Sbjct 333519 TATGCGGCTCAATCAAGTCACCGTCATCCTCGTGGTATGTTAGGAGCGGCTCATCTGCAG 333460 Query 117270 GATCGAATATGTTCTTGGTCC--ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 | ||| || || | || | |||| | || |||||| |||| || |||| ||| || Sbjct 333459 TGTGGAAGAT--TCGTCGTGCGAACGGCGAAAGCCGAGTGTAAATATATCGAGCGCTAGC 333402 Query 117328 AGCA-TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCA 117386 ||| ||| ||||| |||||| |||| || | |||||| ||||||||| ||||| Sbjct 333401 -GCAGTCCGATCCACCTTGAAGACGGCTACCAAAGTTTCCACTTGGCTCCAAGCAGTTCA 333343 Query 117387 GGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCT 117446 ||||||| || || || ||||| || | ||||||||||| || | | | Sbjct 333342 CATTGTTGGACCCGACGAAATTTTGCGCAAGATTGACAATCGTTTGGTGCAAAGAAGTTT 333283 Query 117447 CACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGT 117506 | ||||| || || |||| | | | ||| || | |||| | | ||||| |||| Sbjct 333282 CGCCATGCTGGTAGGCCGCCATCCCTAGAACGAGACCGGAGAGCTCAACAACCTTGATGT 333223 Query 117507 CTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGAC 117566 || | |||| || || | | | || | || || ||||| | || |||| | Sbjct 333222 CTTTCTTCAGATTGCGACGGAAGGAAGTGTACAATACTTTCCGCTGGCCGGGTTTCAAGC 333163 Query 117567 CATCCGCCACGTGAGGGATCGAACGCTTGATGTCCTCAGCGCTAAA 117612 ||||| | || ||| || |||||| || ||||| | | ||||| Sbjct 333162 CATCCACAACTGAAGGTATGGAACGCATGTTGTCCGCCACACTAAA 333117 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 ||| |||||||||||| | ||| | | | | | ||| ||| || ||||| ||||| Sbjct 591702 GACCGTGTGGGAGATTTCGCAGCGTAATATCCTGCAGATGGCTGCAGACCGTGGCGCGTA 591761 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 || ||||||||||||||||| ||||| |||| | | || | ||| |||| | | Sbjct 591762 TATTGACCAGTCCCAGTCTCTCAACATTCACATGAAAGAGCCCACCATGGGCAAGATTAC 591821 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 | ||||| ||| || ||||||| ||| || ||||| || ||||||||||| || || Sbjct 591822 CAGTATGCATTTTGCTGGATGGAAGATGGGTCTGAAGACTGGCATGTACTATCTCCGCAC 591881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212087405600