Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq406 196 5e-45 seq394 134 2e-26 seq283 127 2e-24 seq403 111 2e-19 >seq406 Length=409633 Score = 196 bits (216), Expect = 5e-45 Identities = 173/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| ||||| |||||||| || || |||||||| ||||| |||| | || | Sbjct 106647 GTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAGTCCAGTGACACGATCGAC 106706 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || ||||||||||||||||| ||||| || |||||||| ||||| ||| Sbjct 106707 AATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTGATT 106766 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || |||||||||||||||| ||||| || | || || || |||| || || Sbjct 106767 TTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAAGAG 106826 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||||||||| || |||||||||||||| |||||| Sbjct 106827 TCCACTCTTCACCTTGTCTTGCGTCTTCGTGGTGGA 106862 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || |||||||| ||||| ||||| | || || ||||| | Sbjct 107091 ATGCAGATTTTCGTGAAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCT 107150 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||| | || ||||| || |||||||||||||| ||||||||| Sbjct 107151 GATACCATTGACAACGTAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACCAG 107210 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || ||||| || || ||||| | ||||||| ||||| || | ||||| || Sbjct 107211 CAACGCCTGATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACAAC 107270 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || ||||| || || || ||| | ||||| || ||||| Sbjct 107271 ATTCAGAAAGAGTCCACGCTCCACCTTGTCCTTCGTCTCCGTGGTGG 107317 Score = 145 bits (160), Expect = 9e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || ||||| ||||| || ||||| || || || || || ||||| Sbjct 106862 AATGCAAATATTCGTTAAGACTCTTACGGGGAAGACGATCACGCTGGAAGTGGAGTCCTC 106921 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | || | ||| | ||||| || || |||||||| || || |||||||| Sbjct 106922 TGACACTATCGACAACGTCAAGACGAAAATCCAAGATAAGGAGGGGATCCCGCCAGACCA 106981 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| |||||||| || ||||| || ||||||| ||||| || | ||||| || Sbjct 106982 GCAACGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACACTCTCCGACTACAA 107041 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | || || || ||||| Sbjct 107042 CATCCAGAAGGAGTCCACACTCCACCTTGTTCTTCGCCTCCGTGGTGG 107089 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || ||||| || ||||| ||||| || || | || | ||| | || | ||| | Sbjct 106370 ACTGGGAAGACCATCACTCTAGAGGTCGAATCCAGCGACACCATCGACAACGTTAAGACC 106429 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| |||||||| |||||||||||| | || || ||||| ||| Sbjct 106430 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGTTTGATCTTCGCTGGAAAG 106489 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | ||||||||| | |||||||| | || ||||| || ||||| || Sbjct 106490 CAGCTTGAGGACGGTCGTACCCTGTCCGACTATAACATTCAGAAGGAGTCTACTCTCCAC 106549 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || || || Sbjct 106550 CTTGTCCTCCGTCTGCGTGGCGG 106572 Score = 132 bits (146), Expect = 5e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| || || || || | || |||||| || | Sbjct 107319 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAG--AGCT 107376 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || ||||| | || || || || |||||||||||||| || || | Sbjct 107377 CCGACACCATCGATAACGTGAAGACCAAGATCCAAGATAAGGAGGGAATTCCACCGGATC 107436 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || |||||||||||||| || || |||| ||| || || | || || | Sbjct 107437 AGCAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACA 107496 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| ||||| | || | ||||| || ||||| Sbjct 107497 ATATCCAGAAGGAGAGCACCCTTCACTTGGTTCTCCGTCTCCGTGGTGG 107545 >seq394 Length=603486 Score = 134 bits (148), Expect = 2e-26 Identities = 143/186 (77%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || || ||||| ||||| || || |||||||| | || | ||| Sbjct 13885 CTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 13826 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| | || || |||||||||||||| || || || |||||||||||| | Sbjct 13825 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTTT 13766 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || ||||||||||| |||||||||| |||||| | ||| ||||| || |||| | Sbjct 13765 GATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACCTTGAGC-GACTACAACATCCAGA 13707 Query 27593 AGGAAT 27598 ||| || Sbjct 13706 AGGTAT 13701 >seq283 Length=1466191 Score = 127 bits (140), Expect = 2e-24 Identities = 153/206 (74%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGG-GTCGTCGTTTGGTCAGCGT 64719 || |||||| ||||||| ||||| ||||| | | || ||| | || | |||||| Sbjct 249045 AAGAAGGCTCAATGGGCTATCCGTTGGATCCAAGACAAGGAGTCCACCTTCGCTCAGCGA 249104 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 || | || ||||| ||| || || || |||||||||||||| ||| || || ||| Sbjct 249105 CTTGTTGCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTTTCGCATCGATCTTC 249164 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || ||||||||||| || | || || |||||||||||||| || Sbjct 249165 TGGCTGAAGAAGCGCGGTCTGATGCCAGGCCTTACCTTCTCTAACGAGCTGATCTCGCGT 249224 Query 64840 GACGAGGGGCTCCACCAAGAATTTGC 64865 ||||| || |||||| || ||||| Sbjct 249225 GACGAAGGTCTCCACACTGACTTTGC 249250 >seq403 Length=471098 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||||||| | || || || || ||||| |||||| Sbjct 10747 GACAAGGAGGGTATCCCGCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAG 10688 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | ||| || || | ||||| || |||| ||||| || || || ||||| ||| || Sbjct 10687 GACGGTCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCATCTCGTCCTG 10628 Query 27619 CGTCTTCGCGGTGG 27632 |||||||| ||||| Sbjct 10627 CGTCTTCGTGGTGG 10614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306322280640