Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq406 140 2e-28 seq403 95.1 8e-15 >seq406 Length=409633 Score = 140 bits (154), Expect = 2e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||||||||||| || || || ||||| ||||| || || Sbjct 107536 AGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCGA 107477 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || ||||| ||||| || | ||| || || ||||| || | ||||||| Sbjct 107476 CCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCC 107417 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| |||| || || || ||| || || ||||| |||||| ||||||| ||| Sbjct 107416 TTATCTTGGATC-TTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTCAACTTCCAAGGT 107358 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||||| ||||| | || || || || |||||||| Sbjct 107357 GATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| |||||| || ||||| || || || ||||| || | || ||||| || Sbjct 107065 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGC 107006 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || |||||||| || | ||| || ||||| ||||| | |||||||| ||| ||| ||| Sbjct 107005 TTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATCTTGGAT-TTT 106947 Query 34624 TGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || ||||| | ||||||||||| || ||||| || || || Sbjct 106946 CGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTTCCCCGT 106887 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || || || || ||||| Sbjct 106886 AAGAGTCTTAACGAATATTTGCAT 106863 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||| || |||||||| || || ||||| || || | || || | || Sbjct 107293 TGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCCAACTGC 107234 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | || || ||||| ||||| | ||||||||| ||| ||||| Sbjct 107233 TTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATCTTGAATCTTC 107174 Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | ||| || || | ||| ||||||| || ||||| || ||||| Sbjct 107173 -GTCTTTACGTTGTCAATGGTATCAGAGGACTCGACTTCCAACGTAATCGTCTTTCCGGT 107115 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | |||||||| ||||||||||| Sbjct 107114 AAGAGTTTTCACGAAAATCTGCAT 107091 Score = 98.7 bits (108), Expect = 6e-16 Identities = 115/154 (75%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | || | |||||||| |||||| ||||||||||| || || Sbjct 106572 CCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAC 106513 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || || || || || |||||||| |||||||| || Sbjct 106512 AGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGGA 106453 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG 34633 | ||||||||||| |||| || || |||||| Sbjct 106452 ATACCCTCCTTGTCCTGGATC-TTGGTCTTAACG 106420 >seq403 Length=471098 Score = 95.1 bits (104), Expect = 8e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||| || | |||||| || |||||| || ||||| || || || Sbjct 10614 CCACCACGAAGACGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 10673 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || || ||||| || || |||||||| ||||| ||||| Sbjct 10674 AGCGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGGG 10733 Query 34600 ACTCCCTCCTTGTCTGT 34616 | |||||||||||||| Sbjct 10734 ATACCCTCCTTGTCTGT 10750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727405941276