Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq406 93.3 4e-14 seq403 82.4 7e-11 >seq406 Length=409633 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC---GACTCGATT 27056 || || || || || |||||| | || || ||||| ||||| |||| ||| |||| Sbjct 106647 GTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGA---GTCCAGTGACACGATC 106703 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || ||||| ||||| || ||||| || ||||| || || ||| | Sbjct 106704 GACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTG 106763 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| ||||| ||| | || || | || | |||||||||||||| || || Sbjct 106764 ATTTTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAA 106823 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || | || | || |||||| | || ||||| || Sbjct 106824 GAGTCCACTCTTCACCTTGTCTTGCGTCTTCGTGGTGGAAT 106864 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| ||||| ||| | ||||| | ||||| || | || Sbjct 107091 ATGCAGATTTTCGTGAAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCT 107150 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || |||||||| || || || || || || || || Sbjct 107151 GATACCATTGACAACGTAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACCAG 107210 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | |||||| || || ||||| || | || |||| || |||||| Sbjct 107211 CAACGCCTGATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACAAC 107270 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || | || | || | ||| | || ||||| || Sbjct 107271 ATTCAGAAAGAGTCCACGCTCCACCTTGTCCTTCGTCTCCGTGGTGGTAT 107320 >seq403 Length=471098 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| || || || || ||||| || |||||||| || | |||||| || || | || Sbjct 10748 AGACAAGGAGGGTATCCCGCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGA 10689 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||| || || | ||||| |||||||| || ||||||||||| | ||| | || | Sbjct 10688 GGACGGTCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCATCTCGTCCT 10629 Query 27200 GCGTTTGCGGGGTGGCAT 27217 |||| | || ||||| || Sbjct 10628 GCGTCTTCGTGGTGGTAT 10611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915290333440