Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq406 179 9e-40 seq394 113 1e-19 >seq406 Length=409633 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| ||| ||| || ||||| || ||||||| ||| || | |||||| Sbjct 107530 AGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCT 107471 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || ||||| || || || |||| ||| ||||| || Sbjct 107470 TCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTTATCT 107411 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| ||||| ||||| || | |||||||| Sbjct 107410 TGGATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTCAACTTCCAAGGTGATCGTT 107351 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| || || | |||||| Sbjct 107350 TTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Score = 163 bits (180), Expect = 7e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | |||||||||||||||||||||||| |||||||| ||||| | || || Sbjct 106856 ACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGT 106797 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || || |||||||||||||| || || ||||| ||||| || |||| || Sbjct 106796 ACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCC 106737 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || || || ||||| |||||| | || ||||| || Sbjct 106736 CTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCACCTCAAG 106677 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| ||||| || || || ||||| || Sbjct 106676 GGTGATGGTCTTGCCAGTAAGGGTCTTGAC 106647 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||||||||| || ||||| || || | ||| || | ||||| Sbjct 107302 AGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCC 107243 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || ||||| || |||||||| ||||| || |||| ||| ||||| || Sbjct 107242 TCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATCT 107183 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| || ||||| |||||| || || || | || |||||| Sbjct 107182 TGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGACTTCCAACGTAATCGTC 107123 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| || || || | |||||| Sbjct 107122 TTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || || |||||||| || | ||||| | || || Sbjct 106557 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGACAGGGTACGACCGTCC 106498 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| ||||||| || ||||||||| Sbjct 106497 TCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 106438 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| | ||| ||||| |||||||| ||| Sbjct 106437 TGGATCTTGGTCTTAACGTTGTCGATGGTGTCGCTGGATTCGACCTCTAGAGTGATGGTC 106378 Query 211083 TTTCCCGT 211090 || || || Sbjct 106377 TTCCCAGT 106370 Score = 149 bits (164), Expect = 1e-30 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || |||||||| || || | || || | ||||| Sbjct 107074 AGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCC 107015 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || || || || ||||| ||||| || || | || ||||| || Sbjct 107014 TCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATCT 106955 Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||||| ||| || || ||||| ||||| ||||||||| || || || || |||||||| Sbjct 106954 TGGAT-TTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGT 106896 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| ||||| |||||||| || || | |||||| Sbjct 106895 CTTCCCCGTAAGAGTCTTAACGAATATTTGCATT 106862 >seq394 Length=603486 Score = 113 bits (124), Expect = 1e-19 Identities = 137/183 (75%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 || |||||||| || || | ||||| | | ||||| || |||||||| || |||||||| Sbjct 13706 TTCTGGATGTTGTAGTCGCTCAAGG-TACGGCCATCCTCGAGCTGCTTACCAGCGAAGAT 13764 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 | || || ||||| || || | || ||||||||||||||||| || ||||| || Sbjct 13765 CAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 13824 Query 211046 GATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||||||| ||| ||||| ||||| || || ||||| ||||| || ||||| || Sbjct 13825 GATGGTGTC---GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 13881 Query 211103 AAA 211105 || Sbjct 13882 GAA 13884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159143504864780