Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq406 89.7 3e-13 >seq406 Length=409633 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| || || ||||| ||||| || | ||||| || ||| | Sbjct 107091 ATGCAGATTTTCGTGAAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCT 107150 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | |||| || ||| || || || || | |||||||| || Sbjct 107151 GATACCATTGACAACGTAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACCAG 107210 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || || ||||| || || |||| || | || ||| | || |||||| Sbjct 107211 CAACGCCTGATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACAAC 107270 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 107271 ATTCAGAAAGAGTCCAC 107287 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| |||||||||||||| | |||||||| | | Sbjct 107319 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAGAGCTCC 107378 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | || || || || || || || || | || || ||||| Sbjct 107379 GACACCATCGATAACGTGAAGAC-CAAGATCCAAGATAAGGAGGGAATTCCACCGGATCA 107437 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || ||||| || || || |||||||| | |||||| | |||||||| Sbjct 107438 GCAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACAA 107497 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || ||| ||| | || || ||| Sbjct 107498 TATCCAGAAGGAGAGCACCCTTCACTTGGTT 107528 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| || ||||| || || || || ||||| || || || || |||| ||||| | | Sbjct 106645 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAGTCCAGTGACACGATCG 106704 Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 | ||| | || || || | || ||||| || || | || || || || || ||| | Sbjct 106705 ACAATGTCAAGACGAAGA-TTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTG 106763 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799 || || || ||||| ||||| || || | || ||| | |||||||||||| || ||| Sbjct 106764 ATTTTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAA 106823 Query 23800 GAGTCCAC 23807 |||||||| Sbjct 106824 GAGTCCAC 106831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007243650576