Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq283 158 2e-33 >seq283 Length=1466191 Score = 158 bits (174), Expect = 2e-33 Identities = 578/900 (64%), Gaps = 14/900 (2%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||| ||||| || ||||||| |||| ||||| || || || || | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || ||||| | || ||| ||||||||||| | || || |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | ||| || | |||| ||| || || || ||||| ||| || | ||||| | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| || |||||||| || | ||| || || | | | || || || ||||||||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || |||| ||| || || ||||| ||||| || | | ||| || | ||| || ||||| Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 | || || || ||| || || || | || ||||| | | | | || Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTGAGACCG 590344 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || || || ||| |||| || || | |||||| || || || || ||||| || || Sbjct 590343 ATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTTCA 590284 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 || || || || |||| | | || ||||| | | ||| || ||| || Sbjct 590283 ATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTACCA 590224 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 || |||||||||||||| || ||||| || || | || | ||| | | | || ||| Sbjct 590223 GCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAGTT 590164 Query 78465 TCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523 || || ||| ||| ||||| || | || || || || || || ||||||| ||| || Sbjct 590163 TCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATGTG 590105 Query 78524 CTGAGGTCTTT---CAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 78580 || || | || ||||| || |||| || | | |||||| || | || Sbjct 590104 TTGTGGACGTTCCGCAACCTTCCCATTA---ATCCGTAGGAGGTATGACCGCTCAAGCGT 590048 Query 78581 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTT 78640 |||||||| || |||| || ||||| | || || | ||| |||| || |||| Sbjct 590047 CTTAAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTC 589988 Query 78641 ATCTTTGTATTTGGTAACAATATCCATGACAGT---AGTTGAAATAATAGGAGATCGTAC 78697 | | | ||| | ||||| || | ||| | || || ||||| | | | Sbjct 589987 ACCCGCATGTTTCATGACAATTTC---GTAAGTTTGATCCGATATCATAGGTGCTGCTTG 589931 Query 78698 ACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttt 78757 | ||| || ||||||||| ||| | ||||||| || || |||| | || || Sbjct 589930 ATTATTCTTCGGATTAACAAAGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTT 589871 Query 78758 tGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 |||| |||||| || || || || || || | ||||| || || || || || || || Sbjct 589870 CGTTTGCTTGTGAAGGTTGGAAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/212 (69%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 || || ||||| ||| || |||||||| || | || | |||||||| || || Sbjct 249256 AAGCAAGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAGAGAAGGTA 249197 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 || || ||||| || || || || || ||||| || || | |||||||| ||||||||| Sbjct 249196 AGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACCCAGAAAAG 249137 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTG--- 48314 || || || || || || ||||| || ||||| || || | ||| || ||| Sbjct 249136 AAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCTGAGCGAAGGTGGACTCCTTGTCT 249077 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTT 48346 || ||||| || ||||| | ||||||||| Sbjct 249076 TGGATCCAACGGATAGCCCATTGAGCCTTCTT 249045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663833118080