Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq283 196 7e-45 >seq283 Length=1466191 Score = 196 bits (216), Expect = 7e-45 Identities = 586/897 (65%), Gaps = 8/897 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| ||||| || ||||||| |||||||||| || |||||||| | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | || ||| ||||||||||| | || || |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | ||| || | |||| ||| || || || ||||| ||| || | |||||| | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| || |||||||| || | ||| || || | | |||| || || ||||||||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || |||| ||| || |||||||| ||||| || | | ||| || | ||| || ||||| Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||| || || ||| || || || |||||||| | | || || Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTGAGACCG 590344 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || ||| | || ||||| | || || || || |||||||||||||| || Sbjct 590343 ATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTTCA 590284 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || ||||| || |||| | | || ||||| | | ||| || ||| || Sbjct 590283 ATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTACCA 590224 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || ||||| ||||| || || ||||| ||||| | || | ||| | | | || ||| Sbjct 590223 GCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAGTT 590164 Query 77060 TCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118 || || || ||| || || || | || || || || || || ||||||| ||| || Sbjct 590163 TCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATGTG 590105 Query 77119 CTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 77178 || || ||||| || ||| ||| || | | |||||| || | || || Sbjct 590104 TTGTGGACGTTCCGCAACCTTCCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTCTT 590045 Query 77179 AAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTC 77238 |||||| || |||| || ||||| | || || | ||| | || || |||| | Sbjct 590044 AAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTCACC 589985 Query 77239 CTTATATTTGGTAACAATATCCATGACAGTGGT-AGAAATAATTGGAGATCGT--ATTCC 77295 | || ||| | ||||| | | | | || | || || || || | | | ||| Sbjct 589984 CGCATGTTTCATGACAAT-TTCGTAAGTTTGATCCGATATCATAGGTGCTGCTTGATT-- 589928 Query 77296 ATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGT 77355 ||| || ||||||||| ||| | |||| || || || | |||| | || || || Sbjct 589927 ATTCTTCGGATTAACAAAGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTTCGT 589868 Query 77356 TTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || |||||| || || || ||||| || | ||||| || || || ||||| || || Sbjct 589867 TTGCTTGTGAAGGTTGGAAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 91.5 bits (100), Expect = 2e-13 Identities = 192/285 (67%), Gaps = 10/285 (4%) Strand=Plus/Minus Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563 ||||| || | ||| ||| || || || ||||| || || || || || || |||||| Sbjct 249379 TTCATACCGAGAAGTGCGACGGGAAGGGCATCCGTCAGGAATTCCTGCTCGATGGTGACA 249320 Query 46564 GCATCCGATATTATC-----GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTT 46618 || |||| || || |||| ||| || || ||||| || | ||| Sbjct 249319 GCCTCCGTGATGATGTCTTGGATGAC-CTGCTTGCTGGGGCGGTGGTTG----AGATGAG 249265 Query 46619 TAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAG 46678 || | || || ||||| ||| || || ||||| || | || | ||||||| Sbjct 249264 AGAAAAGCAAGCAAGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAG 249205 Query 46679 AAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATC 46738 | || || || || ||||| || || ||||| || ||||| || || | |||||||| | Sbjct 249204 AGAAGGTAAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACC 249145 Query 46739 CAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCT 46783 |||||||||| || || || ||||| || || || ||||||| || Sbjct 249144 CAGAAAAGAAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCT 249100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929302519040