Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq406 107 4e-18 >seq406 Length=409633 Score = 107 bits (118), Expect = 4e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || || || ||||| || ||||||||||| |||| | || | ||||| Sbjct 107074 AGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCC 107015 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| || || || | |||||||| | || ||| || ||||| | Sbjct 107014 TCAAGCTGCTTT--CCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTAT 106957 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| ||||| ||||| | || | |||| || ||| ||||| || || || | Sbjct 106956 CTTGGATTTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCG 106897 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || ||||| |||||||| ||||| | |||||| Sbjct 106896 TCTTCCCCGTAAGAGTCTTAACGAATATTTGCATT 106862 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || ||| || ||||| |||||||| | | ||| | Sbjct 107537 GAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCG 107478 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || || ||||| || | ||||| |||| | ||||| || Sbjct 107477 ACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTC 107418 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || || | || | | |||| || ||||| ||||| | || Sbjct 107417 CTTATCTTGGATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTCAACTTCCAAGGT 107358 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||||||||| ||||||| |||||| Sbjct 107357 GATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Score = 102 bits (112), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| |||||||| |||||||||||||||| | ||| | ||||| || Sbjct 106844 GACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTACGGCCATCCTC 106785 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || || || ||||| || || | |||||||| | | || || ||||| || || Sbjct 106784 GAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 106725 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||| || |||||| | || | ||| ||| | ||| || ||||| || || || Sbjct 106724 AATCTTCGTCTTGACATTGTCGATCGTGTCACTGGA--CTCCACCTCAAGGGTGATGGTC 106667 Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094 ||||| || || ||||| |||| Sbjct 106666 TTGCCAGTAAGGGTCTTGACGA 106645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153812343935812