Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq406 192 1e-43 seq394 132 1e-25 seq403 114 3e-20 seq405 87.8 4e-12 seq283 87.8 4e-12 >seq406 Length=409633 Score = 192 bits (212), Expect = 1e-43 Identities = 180/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| || || || | ||| || || |||||||||||||| | Sbjct 107090 ACCACCACGGAGGCGAAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGA 107031 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || |||||||| || | |||||| ||||| ||| Sbjct 107030 GAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGG 106971 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| |||||||| || | || ||| | ||||||||||| || | || || Sbjct 106970 GATCCCCTCCTTATCTTGGATTTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCAC 106911 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| || ||||||||||| ||||| | ||||||||||||||| |||||| Sbjct 106910 TTCCAGCGTGATCGTCTTCCCCGTAAGAGTCTTAACGAATATTTGCATT 106862 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | |||| ||||| || ||||||||||||| Sbjct 107318 ACCACCACGGAGACGAAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGA 107259 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| | || || ||||| || |||| ||||| ||||| ||| Sbjct 107258 AAGAGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGG 107199 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| ||||| ||||| | |||||| | || || || || || | ||||| Sbjct 107198 AATTCCCTCCTTATCTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGAC 107139 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || |||||||| || || | ||| || ||||| |||||||| Sbjct 107138 TTCCAACGTAATCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | ||||| || || ||||| ||||| || | | Sbjct 107545 CCACCACGGAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAA 107486 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || || || || || |||||||| | |||||| || || ||| Sbjct 107485 AGAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGA 107426 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || |||||||| ||||||||||| | || ||| ||||||| |||| || |||| || || Sbjct 107425 ATTCCCTCCTTATCTTGGATCTTGGTCTTCACGTTATCGATGGTGT-CGGAGCTCTCAAC 107367 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | |||||||| || || || | |||||| ||||| |||||||| Sbjct 107366 TTCCAAGGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| || || || || || | || || || || ||||| ||||| | Sbjct 106573 ACCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGA 106514 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| || || || || || ||||||||||| || ||||| || Sbjct 106513 CAGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGG 106454 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || ||| | ||||| ||||| | |||||| Sbjct 106453 AATACCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTGTCGCTGGATTCGAC 106394 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || |||||||| ||||| || |||| Sbjct 106393 CTCTAGAGTGATGGTCTTCCCAGTCA 106368 Score = 122 bits (134), Expect = 2e-22 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | || || || | ||| ||||| ||||||||||| || | Sbjct 106861 CCACCACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 106802 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| ||||| || || || || |||| |||||| ||||| ||| Sbjct 106801 AGAGTACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGA 106742 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | ||||| ||||| | || || Sbjct 106741 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCACC 106682 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || || ||||| ||||| || || | ||||| |||| Sbjct 106681 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGA 106645 >seq394 Length=603486 Score = 132 bits (146), Expect = 1e-25 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTC-AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGAT 282970 || |||||||||||||| |||| || ||||||||||| || || || || || ||||| Sbjct 13706 TTCTGGATGTTGTAGTCGCTCAAG-GTACGGCCATCCTCGAGCTGCTTACCAGCGAAGAT 13764 Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030 |||||| || ||||| || |||||||||||||| |||||||| | || ||| | || Sbjct 13765 CAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 13824 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | || || ||||| || || ||||||||||||| ||||| ||||| Sbjct 13825 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 13884 >seq403 Length=471098 Score = 114 bits (126), Expect = 3e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | ||| || || |||||||||||||| | Sbjct 10613 ACCACCACGAAGACGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 10672 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| || ||||| || || || ||||| ||||||||||| || ||||| ||| Sbjct 10673 GAGCGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGG 10732 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 10733 GATACCCTCCTTGTCT 10748 >seq405 Length=457542 Score = 87.8 bits (96), Expect = 4e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||| || || | ||||| |||| |||| || |||| || ||||||||| Sbjct 116291 GTGAGTAATGACAACAATACCACCCTCGAAGGTCTTGAGAGCCTTGTTCAGGGCACCGAG 116232 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 | || ||||| | ||||||| ||||| ||||| ||||||||||| || | ||||| Sbjct 116231 AGAGTCACGGTCGAGGTAGTTGGTAGGCTCGTCAAGGACGATGACGTGAGGACGCTGCCA 116172 Query 315771 TAGAGC-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAG 315829 |||| |||| | | || | ||| | || |||||||||| ||||| || || | Sbjct 116171 -CGAGCAGGCGGCCAGGACAACCTTGACACGCTGGCCACCAGACAAACCACGCATACGCG 116113 Query 315830 AATGAGT 315836 | ||||| Sbjct 116112 AGTGAGT 116106 >seq283 Length=1466191 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 ||| |||| ||||| || |||||| | ||||| ||||||||||| || ||||| | Sbjct 249366 CTTCTCGGTATGAACGCCAGACTCATGTGCCAATACATCGAATTCGTCGCCGATCGCCTC 249425 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| | || || | | ||| || | || ||||||| || | ||| ||||| Sbjct 249426 CTCGTTTCTCTCGGAAATGGCAAATACTACCATGCCCAGAACCCGTTTGATTTCATGGAC 249485 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 |||||| || | ||||| || |||||||| || |||||||| | ||||| || | | Sbjct 249486 AACATTTCCCTACCCGGGAAGACGAACTTCTTTGAGAAGCGTGTTGGTGATTACCAGAAG 249545 Query 230403 CCCGGTGT 230410 | ||||| Sbjct 249546 GCTGGTGT 249553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046731528710088