Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq406 150 4e-31 seq394 113 1e-19 seq403 84.2 5e-11 >seq406 Length=409633 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| ||||||||||||||| | || || || ||||| ||| Sbjct 107322 CAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAGAGCTCCGAC 107381 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || || || || ||||| || ||||| |||||| Sbjct 107382 ACCATCGATAACGTGAAGACCAAGATCCAAGATAAGGAGGGAATTCCACCGGATCAGCAA 107441 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| |||||||| | |||||| | ||||| || || Sbjct 107442 CGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACAATATC 107501 Query 178104 CAAAAAGA 178111 || || || Sbjct 107502 CAGAAGGA 107509 Score = 147 bits (162), Expect = 5e-30 Identities = 159/208 (76%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || |||||||| || || ||||| ||| ||| Sbjct 106866 CAAATATTCGTTAAGACTCTTACGGGGAAGACGATCACGCTGGAAGTGGAGTCCTCTGAC 106925 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || ||||| |||||||| || ||| || || || || || || ||||| || |||||||| Sbjct 106926 ACTATCGACAACGTCAAGACGAAA-ATCCAAGATAAGGAGGGGATCCCGCCAGACCAGCA 106984 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 ||| || || || |||||||| ||||| || ||||| | || || |||| || ||| | Sbjct 106985 ACGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACACTCTCCGACTACAACAT 107044 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130 ||| || || || ||||| || |||||| Sbjct 107045 CCAGAAGGAGTCCACACTCCACCTTGTT 107072 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || |||||||| |||||||| | ||||| |||| Sbjct 106645 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAGTCCAGTGACACGATCG 106704 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| |||||||||||||| || || || || || ||||||||||| || | Sbjct 106705 ACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTGA 106764 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | ||||| || || || ||||| ||||| | ||||| ||||||| ||| |||| |||| Sbjct 106765 TTTTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAAG 106824 Query 178111 AATCAACACTGCATCTTGTTTTG 178133 | || || || || ||||| ||| Sbjct 106825 AGTCCACTCTTCACCTTGTCTTG 106847 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||||||| || ||||| ||||| || | || || || ||| || Sbjct 107094 CAGATTTTCGTGAAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCTGAT 107153 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || |||||||| || || || ||||| || || ||||||||| Sbjct 107154 ACCATTGACAACGTAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACCAGCAA 107213 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| ||| | || ||||| | |||||| | || || ||| | Sbjct 107214 CGCCTGATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACAACATT 107273 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || ||||| Sbjct 107274 CAGAAAGAGTCCACGCTCCACCTTGT 107299 Score = 118 bits (130), Expect = 3e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || ||||| || ||||| ||| | ||||||||||| ||||| || Sbjct 106370 ACTGGGAAGACCATCACTCTAGAGGTCGAATCCAGCGACACCATCGACAACGTTAAGACC 106429 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || || |||||||||||||| || | |||||||| ||||| Sbjct 106430 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGTTTGATCTTCGCTGGAAAG 106489 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || || || | || || |||| |||||| | || || || || || || || Sbjct 106490 CAGCTTGAGGACGGTCGTACCCTGTCCGACTATAACATTCAGAAGGAGTCTACTCTCCAC 106549 Query 178125 CTTGT 178129 ||||| Sbjct 106550 CTTGT 106554 >seq394 Length=603486 Score = 113 bits (124), Expect = 1e-19 Identities = 137/183 (75%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986 ||||| || || || || || || || || |||||||| || || ||| |||||| Sbjct 13884 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACACC 13828 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| |||||||| ||||| |||||||| || || ||||| ||||||||||| || Sbjct 13827 ATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGT 13768 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCA 178105 | |||||||| || || |||||||| ||||| | || |||| ||| || ||| |||| Sbjct 13767 TTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTAC-CTTGAGCGACTACAACATCCA 13709 Query 178106 AAA 178108 || Sbjct 13708 GAA 13706 >seq403 Length=471098 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || |||||||| || | |||||||||||||| |||||||| Sbjct 10747 GACAAGGAGGGTATCCCGCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAG 10688 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || | || || |||| || ||| |||| || || || || || ||||| || Sbjct 10687 GACGGTCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCATCTCGT 10632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203722378154968