Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq406 125 7e-24 seq394 114 1e-20 seq403 111 1e-19 >seq406 Length=409633 Score = 125 bits (138), Expect = 7e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || || |||||||||||||||||||||||| Sbjct 106572 CCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAC 106513 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || |||||||| || ||||| |||| ||||| ||||||| ||| Sbjct 106512 AGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGGA 106453 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| |||| | | | |||||||| || || || Sbjct 106452 ATACCCTCCTTGTCCTGGATCTTGGTCTT-AACGTTGTCGATGGTGTCGCTGGATTCGAC 106394 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || || || || || |||| Sbjct 106393 CTCTAGAGTGATGGTCTTCCCAGTCA 106368 Score = 120 bits (132), Expect = 3e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||| ||||| ||||||||| Sbjct 107089 CCACCACGGAGGCGAAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 107030 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || || | || || |||||||| ||||| || || || || || ||||| ||||| Sbjct 107029 AGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGG 106970 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | | |||||| || |||||| ||| ||| | | | |||||| ||||||| Sbjct 106969 ATC-CCCTCCTTATCTTGGATTTTCGTCTT-GACGTTGTCGATAGTGTCAGAGGACTCCA 106912 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| ||| ||||| || ||||| || ||||| ||||| || ||||| Sbjct 106911 CTTCCAGCGTGATCGTCTTCCCCGTAAGAGTCTTAACGAATATTTGCAT 106863 Score = 118 bits (130), Expect = 1e-21 Identities = 161/220 (73%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || ||| ||| ||||| ||||| || ||||| Sbjct 106861 CCACCACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 106802 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||| |||||||| ||||| ||||| || || ||||| | |||| Sbjct 106801 AGAGTACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGA 106742 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || | ||| || | ||| ||||| || |||||| Sbjct 106741 ATGCCCTCCTTGTCC-TGAATCTTCGTCTTGACATTGTCGATC--GTGTCACTGGACTCC 106685 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||||| | || || || || || || || ||||| |||| Sbjct 106684 ACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGA 106645 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || |||||| ||| ||||||||||| ||||| || Sbjct 107317 CCACCACGGAGACGAAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAA 107258 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || | |||||| |||||||| |||||||| || ||||| | ||| Sbjct 107257 AGAGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGA 107198 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| | | ||| | || | | ||| | | | || || ||||| || Sbjct 107197 ATTCCCTCCTTAT-CTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGAC 107139 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| ||||| || || || || || || |||||||||||||| Sbjct 107138 TTCCAACGTAATCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || |||||||||||||| || || || || || Sbjct 107545 CCACCACGGAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAA 107486 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| || || || || || || || || |||| ||| Sbjct 107485 AGAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGA 107426 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| || ||| || |||| ||| | | |||||| ||| || Sbjct 107425 ATTCCCTCCTTATCTTGGATCTTGGTCTTC-ACGTTATCGATGGTGTCGGAGCTCTCAAC 107367 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || |||||||| || || || ||||| ||||| |||||||| Sbjct 107366 TTCCAAGGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 >seq394 Length=603486 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| | ||| || | || ||||||||||| || ||||| | Sbjct 13704 CCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGA 13763 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 ||| ||||| ||||||| ||| | | |||||||||| ||| || ||| ||| | Sbjct 13764 TCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 13822 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 13823 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 13882 Query 41852 AA 41853 || Sbjct 13883 AA 13884 >seq403 Length=471098 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| ||||| ||||||||| ||||| ||||||||| Sbjct 10614 CCACCACGAAGACGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 10673 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| ||||||||||| |||||||| |||| ||||| ||||| | || Sbjct 10674 AGCGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGGG 10733 Query 41756 ACGCTCTCCTTGTC 41769 | | ||||||||| Sbjct 10734 ATACCCTCCTTGTC 10747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462300694526400