Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 129 1e-24 >seq1 Length=3626568 Score = 129 bits (142), Expect = 1e-24 Identities = 274/405 (68%), Gaps = 8/405 (2%) Strand=Plus/Plus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| |||||| ||| || ||||||| ||||| | || |||||| ||| Sbjct 1873402 CCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCA 1873461 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || ||||||||||| || || || | | |||| | || ||| || || || | Sbjct 1873462 TCTCGCGCGACGAGGGCCTGCA-CACCGACTTCGCCTGCCTGCTGTTCTC---GCACCTG 1873517 Query 230356 AACAAGCTACCATTC---GAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAA 230412 || || | || | |||| ||| | | |||| || || || || || | ||| Sbjct 1873518 AAGAACCGCCCGAGCAAGGAGATCGTCCAGAAGGTCATCACCGATGCCGTGGAGATCGAG 1873577 Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATG 230472 |||||||| | || || | || || ||| | ||||||||||| | || ||| Sbjct 1873578 CAGGAGTTCCTCACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATG 1873637 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 ||||||||||| ||||| ||||||||| | | || || || || |||| || || Sbjct 1873638 AAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGACAAGGTC 1873697 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592 ||| ||| | |||||||| | || |||||| ||| ||||| || ||||||||| Sbjct 1873698 TACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAAC 1873757 Query 230593 TTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||| ||||| ||| | || || |||| | | || || ||| Sbjct 1873758 TTCTTCGAGAAGCGCGTCGGCGAGTACCAGAAGGCCGGCGTCATG 1873802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822644663000