Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=3626568 Score = 86.0 bits (94), Expect = 6e-12 Identities = 174/255 (68%), Gaps = 5/255 (2%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| |||||||| || ||| | |||||||| ||||||||||| || || Sbjct 1873170 ATGTACGTGTCGATGAGCAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 1873111 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| || || | || || ||||| | ||| || || | || Sbjct 1873110 AAACCGTAGAAGCATCGCGCCTCGGGAATCTGGACTTCGCCACTGAACCGCTCGACAAGG 1873051 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || ||||| || ||||||||| || || | || ||| || || | Sbjct 1873050 TTCTCGTTGACAATGCCATCAGACGCGGCGAAGAAGGCAAGGATGTGCGAAACAAAGAAC 1872991 Query 17414 TTTTCGTC--CGGT--GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTC 17469 || ||||| |||| || | | |||||| | | ||| ||||| | || | || Sbjct 1872990 TTCTCGTCATCGGTGAGTCTG-TTGTTCCAGTCGTGGAGATCCTTGGACAGGTCGATCTC 1872932 Query 17470 TTCGGGGGTCCAAAA 17484 ||||| |||||| || Sbjct 1872931 TTCGGCGGTCCAGAA 1872917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544953068000