Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq15 241 2e-58 >seq15 Length=644973 Score = 241 bits (266), Expect = 2e-58 Identities = 600/902 (67%), Gaps = 18/902 (2%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || ||||| || || | |||| | | | ||||| || || | ||| ||||| | | | Sbjct 160824 TCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTC 160883 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 ||||| |||| | || || || ||||| || || || |||||||||||||| | || Sbjct 160884 CACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAG 160943 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || | | | ||||| || || ||||| ||||| |||||| | | | Sbjct 160944 AGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAA 161003 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||| || |||||||| |||||||| |||| | | |||||||| ||||| || ||| Sbjct 161004 ACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGCTTGTTGCCACCC 161063 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 ||||| | ||||| |||||||| || | || | | ||| || | ||||||||||| Sbjct 161064 TGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGACGATACCATTGGAC 161123 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310 | || || || |||| ||| || ||| ||||||||||| | || | ||| Sbjct 161124 GTTCCGTTAGTACCGGCGATGTACGAGCCAGTGGCACGAATACGATGGATATTCAAACCG 161183 Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370 || || || ||||| || ||||| | || || ||| | ||||| ||||| ||||| Sbjct 161184 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTATCGTAGATACCCTCG 161243 Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430 || ||||||||| |||| | | || || ||| || | || || || || Sbjct 161244 ATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGCGCCTGAGGTGTACCA 161303 Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490 || || || | ||| || || || || || || |||| |||| | || ||||| ||| Sbjct 161304 GCGTTGAAAAGGGTTGGGGAGGCATGAGTGAAGTATTTGCCAGACATGAGGTTGTAGGTC 161363 Query 54491 TCGAT-AGCTGAGTCTATATCCCATTGATGA------ATTCCTACTGCGACACGCATTAA 54543 || || | || ||| || ||||| | | || || || || |||||||| | Sbjct 161364 TCAATGACCT---TCTCTA---CATTG-TCACCCCAGATACCGACAGCAACACGCATAAT 161416 Query 54544 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAA 54603 ||||||||| ||||| || ||||||||| | | ||||| | |||||| ||||| Sbjct 161417 CATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTCCAA 161476 Query 54604 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 ||| || || || || || | ||| |||||||| || || | |||| | |||| || Sbjct 161477 AGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCAGAGTCGAA 161536 Query 54664 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACT-TGAAATAATCGGAGAATGTT 54722 | ||||| | | | |||| ||| ||| | || | ||| || || || | Sbjct 161537 ATCCTCCTTGTGTCTCATAAC-ACAATCATACGTCTCCTGGGCAATCATGGGGGATGCCT 161595 Query 54723 TCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTA-AATAGtttt 54781 | |||||| | || |||||||||| | | || | | || || | || | || Sbjct 161596 TGCCATTTCTGGGGTTGACATAGTGGTAGAGGTCACTGACGAC-AGACGACCATTGCTTC 161654 Query 54782 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGA 54841 ||||| | ||||| || ||||| ||||| || | ||||| || |||||||| || || Sbjct 161655 TTTGTCTGCTTGTGGAGGTTTGACACGGCGATACGTGCGGCGAGGATGGCATAGTCAGGG 161714 Query 54842 TG 54843 || Sbjct 161715 TG 161716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720857848000