Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq66 167 3e-36 >seq66 Length=76900 Score = 167 bits (184), Expect = 3e-36 Identities = 278/398 (70%), Gaps = 4/398 (1%) Strand=Plus/Minus Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||||||| | | |||||||||||| || ||||| ||||||||| || Sbjct 25091 CACGTAGAACTGCGCGAACATGTGGCAGGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGG 25032 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| ||| |||||| || || || | | ||| | || || || || | Sbjct 25031 GTTCCACGCGCTGAGGATGATCCGCCGGTCGTACGGGCTGTTCCGGAGCTTGTGGATGAC 24972 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || |||||||| ||||||||||| | ||| || | | | | ||| ||||| |||| Sbjct 24971 CTCGGCCAGCTGGTCGACGCCCTGCCCGCTGTAGTCCGCCCTCGCGTCGGCGTACTCGGC 24912 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 |||||||||| ||||||||| ||||||||||| |||||||| ||| ||| | ||| Sbjct 24911 GCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCACGGTGGGA 24852 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--C 146166 || || | | | | ||||| || || ||||||||| ||||||| |||||||| || | Sbjct 24851 GAGGCCCACGCCGTCCAGGAACTCGCGCGACCCGTTGCCGTCCCATATCTTGACACCAGC 24792 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG 146226 || ||||| || | || |||| || ||| ||||| || | ||| ||| Sbjct 24791 TTCTGAAAGAGC-CAGT-GACGACGTGTTGCCTTCGATAAACCAAAGTAACTCGGCGACC 24734 Query 146227 ACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 || | || ||||||| | |||||| |||| ||||| Sbjct 24733 ACGGCTTTCAAGAAGACACGCTTGGTTGTCAATAGGGG 24696 Score = 140 bits (154), Expect = 4e-28 Identities = 139/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||||| |||||| | |||||||||| | ||||||||||||||| |||| |||||| Sbjct 25351 AGCTGGATCTTCAGCGCGTCCACGTGGTCGCAGTAGACGTGCGCGTCGCCCATGACGTGC 25292 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | | || ||| | || | | ||| |||| ||||| |||||||| | |||| Sbjct 25291 GTCAGGCTTCCCGGCACCAGCTCGCATACGTGCGCGATCATGTGCGTCAGCAGCGCGTAG 25232 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||||| ||||||||||| || ||||| |||||||| | || |||||||||||||| ||| Sbjct 25231 CTGGCGATGTTGAAGGGGACGCCCAGGCCCATGTCGCAGGACCGCTGGTACAGCTGACAG 25172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076062404000