Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq90 161 2e-34 seq7 84.2 5e-11 >seq90 Length=1132236 Score = 161 bits (178), Expect = 2e-34 Identities = 284/409 (69%), Gaps = 26/409 (6%) Strand=Plus/Plus Query 253993 CTGGCGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCA 254052 ||| | | || ||||| |||| ||| |||| ||||| ||||| |||||||| || || | Sbjct 268160 CTGACTAGCTGCCTCACATGCTCTTCTACGGGCCTCCGGGAACCGGCAAGACCTCGACGA 268219 Query 254053 TCCTGGCGCTGGCCCGAACC--CTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGA 254110 | |||||||| || ||| |||| || || | || | ||||||||||||| Sbjct 268220 TACTGGCGCTCGC--GAAGGAGCTGTACGGGCCGGAGCTGATAAAGCAGCGCGTGCTCGA 268277 Query 254111 GCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC 254170 ||| ||||| || ||||| ||||| | |||| || || ||| | ||| ||| | Sbjct 268278 GCTCAACGCCTCGGACGAGCGCGGCATCTCGATCGTGCGGGAGAAGGTGAAGGACTTCGC 268337 Query 254171 ---CA---AGAT-GT-----CGATTTCGTCGTTCCA--------ACCCGGCTGTCCGCCT 254210 || || | || ||| || || ||| ||||| || ||||| Sbjct 268338 GCGCATGCAGCTCGTGAGCCCGACGGCGGCGACCCAGGCGCGCTACCCG--TGCCCGCCG 268395 Query 254211 TTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTC 254270 |||||| || | ||||||||||||||||||| ||||||| ||||||||| ||| || Sbjct 268396 TTCAAGATCATCATCCTGGACGAGGCGGACAGCATGACGCAGGACGCGCAGAGCGCGCTG 268455 Query 254271 CGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTG 254330 || || |||||||||||| || | | ||||| || ||||| | |||||||||||| Sbjct 268456 CGGCGCACGATGGAGACGTACAGCAAGATCACGCGCTTCTGCCTCATCTGCAACTACGTG 268515 Query 254331 TCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || |||||||| |||||| || |||||| |||||| || |||| Sbjct 268516 ACGCGGATCATCGACCCGCTCGCCAGCCGGTGCAGCAAGTTCCGCTTCA 268564 >seq7 Length=944196 Score = 84.2 bits (92), Expect = 5e-11 Identities = 113/156 (72%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 254213 CAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCG 254272 |||||| |||||||||||||||||||||| ||||||| | | |||||| || || || Sbjct 14593 CAAGCTGGTGATCCTGGACGAGGCGGACAGCATGACGTCGGGGGCGCAGCAGGCGCTGCG 14534 Query 254273 CCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTC 254332 || |||||||||| |||| |||||| || | | ||||||| | ||| Sbjct 14533 GCGGACGATGGAGATCTACTCGAACACGACGCGGTTCGCGTTCGCGTGCAACCA---GTC 14477 Query 254333 G---AAGATCATCGCCCCGCTGGCTTCTCGGTGCGC 254365 | |||||||||| |||||| || |||||||| Sbjct 14476 GAACAAGATCATCGAGCCGCTGCAGTCGCGGTGCGC 14441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765024236800