Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq15 237 2e-57 seq1 89.7 7e-13 >seq15 Length=644973 Score = 237 bits (262), Expect = 2e-57 Identities = 599/902 (66%), Gaps = 18/902 (2%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 |||||||| || || | |||| | | | ||||| || || | ||| ||||| | | | Sbjct 160824 TCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTC 160883 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 ||||| |||| | || || || ||||| || || || |||||||||||||| | || Sbjct 160884 CACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAG 160943 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | || | | | ||||| || || ||||| ||||| |||||| | | | Sbjct 160944 AGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAA 161003 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | ||| | |||||||| |||||||| ||||| | | |||||||| ||||| || ||| Sbjct 161004 ACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGCTTGTTGCCACCC 161063 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 ||||| | ||||| |||||||| || | || | | ||| || | ||||||||||| Sbjct 161064 TGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGACGATACCATTGGAC 161123 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCT 66341 || || || || |||| ||| || ||| | ||||||||| | || | ||| Sbjct 161124 GTTCCGTTAGTACCGGCGATGTACGAGCCAGTGGCACGAATACGATGGATATTCAAACCG 161183 Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 66401 || || || ||||| || ||||| | || || ||| | ||||| ||||| ||||| Sbjct 161184 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTATCGTAGATACCCTCG 161243 Query 66402 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 66461 || ||||||||| |||| | | || || ||| || | || || || || Sbjct 161244 ATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGCGCCTGAGGTGTACCA 161303 Query 66462 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 66521 || || || | ||| || || || || || || |||| |||| | || ||||| ||| Sbjct 161304 GCGTTGAAAAGGGTTGGGGAGGCATGAGTGAAGTATTTGCCAGACATGAGGTTGTAGGTC 161363 Query 66522 TCAAT-AGCTGAGTCTATATCCCATTGATGA------ATTCCTACTGCGACACGCATTAA 66574 ||||| | || ||| || ||||| | | || || || || |||||||| | Sbjct 161364 TCAATGACCT---TCTCTA---CATTG-TCACCCCAGATACCGACAGCAACACGCATAAT 161416 Query 66575 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 66634 ||||||||| ||||| || ||||||||| | | |||| | |||||| ||||| Sbjct 161417 CATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTCCAA 161476 Query 66635 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 ||| || || || || || | ||| |||||||| || || | |||| | |||| || Sbjct 161477 AGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCAGAGTCGAA 161536 Query 66695 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACT-TGAAATAATCGGAGAATGTT 66753 | ||||| | | | |||| ||| ||| | || | ||| || || || | Sbjct 161537 ATCCTCCTTGTGTCTCATAAC-ACAATCATACGTCTCCTGGGCAATCATGGGGGATGCCT 161595 Query 66754 TCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttt 66812 | |||||| | || |||||||||| | | | || | || || | || | || Sbjct 161596 TGCCATTTCTGGGGTTGACATAGTGGTAGAGGTCACTGACGAC-AGACGACCATTGCTTC 161654 Query 66813 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGA 66872 ||||| | ||||| || ||||| ||||| || | ||||| | |||||||| || || Sbjct 161655 TTTGTCTGCTTGTGGAGGTTTGACACGGCGATACGTGCGGCGAGGATGGCATAGTCAGGG 161714 Query 66873 TG 66874 || Sbjct 161715 TG 161716 Score = 109 bits (120), Expect = 7e-19 Identities = 355/548 (65%), Gaps = 15/548 (3%) Strand=Plus/Plus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | |||||||| ||||| || || | | ||||| || |||||||| Sbjct 159660 TCCTGGTCGACGGTGAATTGGATGGGGTTGGCGGCAGCCTGAGTACGGAGGTAGTACATG 159719 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 ||||| || |||||||| |||| || || ||||| || || | ||| | Sbjct 159720 CCCGTCTTGAGACCGAGCTTCCAACCAGTGAAGTGCATGCTGGTGATCTTGCCCATGGTA 159779 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 || || || || || |||| || ||| || || ||||| || || | ||| ||| Sbjct 159780 GGCTCACGCATGTGAATGTTCAGCGACTGAGACTGGTCAATGAATGCGCCACGGTCGGCA 159839 Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066 ||||| | | || |||| || | ||||||||| | || || |||| ||| || Sbjct 159840 GCCATCTGGACGACCGTCCGCTGAGAAATTTCCCAGACTGTCTTGTAAAGAGACTTGATG 159899 Query 65067 TCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123 ||| | |||| ||| | | ||||||||||| || || || || || || | ||||| Sbjct 159900 TCTGCGGGAACGTTGGGAATGTTCTGAATGGAGCCGCCTTCGGCAATGATGCGGTTCTTC 159959 Query 65124 ATCTCATCATTCCATA-----ATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAA 65178 || |||| ||| | || | | | ||| | | || || || || | Sbjct 159960 ATGCCATCGGACCAAAGACCCATATCCACGAGGT-----CCTTGAGCAGCCAAGGGTTGA 160014 Query 65179 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCA 65238 | || || || || |||| | || | |||| ||| || || ||| || || || | Sbjct 160015 CGACCTGGAACTCGCCAGCAAGGACACGGCGAGAGTAGATGTTGGAGGTGTAAGGCTCGA 160074 Query 65239 CAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATA 65298 | | || || || |||| || || | || ||||| |||||||| |||||||| | Sbjct 160075 AACATTCGTTGTTGCCCAGGATCTGGGAGGTACTGGCAGTGGGCATAGGGGCCACCAACA 160134 Query 65299 AACTATTTCTAAGACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 65357 |||| |||| | ||| | || | |||| | || || || | |||||| | |||||| Sbjct 160135 AACTGTTTCGCACACCATTCTGCT-TGATCTGGTCCTTCAGCGTTTCCCAGTCCCAAAGG 160193 Query 65358 TCCGACGG 65365 || ||||| Sbjct 160194 TCGGACGG 160201 >seq1 Length=3626568 Score = 89.7 bits (98), Expect = 7e-13 Identities = 151/217 (70%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || || ||||| ||| ||| || |||||||| | || | |||||||| Sbjct 1873507 AACAGCAGGCAGGCGAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAG 1873448 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || |||||||| ||||| ||||| || ||||| || |||||||| || | || Sbjct 1873447 AAGGTCAGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAAGGCGCCG 1873388 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT- 36327 ||||| || || || || || || ||||| || || | || || | || ||| Sbjct 1873387 CTGAAGAAGATACCCTCGACGGCGGCGAAGGCGATCAGGCGCTGGGCAAAGGTGG-ACTT 1873329 Query 36328 ---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTC 36361 ||| |||||||| | ||||||||||||||| Sbjct 1873328 CCGGTCGGTAATCCACTTCAGGGCCCAATCGGCCTTC 1873292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171977284000