Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq15 289 4e-73 seq1 104 3e-17 >seq15 Length=644973 Score = 289 bits (320), Expect = 4e-73 Identities = 1331/2079 (64%), Gaps = 53/2079 (3%) Strand=Plus/Plus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | |||||||| ||||| || || | | ||||| || |||||||| Sbjct 159660 TCCTGGTCGACGGTGAATTGGATGGGGTTGGCGGCAGCCTGAGTACGGAGGTAGTACATG 159719 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 ||||| || |||||||| |||| || ||| ||||| || || | ||| | Sbjct 159720 CCCGTCTTGAGACCGAGCTTCCAACCAGTGAAGTGCATGCTGGTGATCTTGCCCATGGTA 159779 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 || || || || || |||| || ||| || || ||||| || || | ||| ||| Sbjct 159780 GGCTCACGCATGTGAATGTTCAGCGACTGAGACTGGTCAATGAATGCGCCACGGTCGGCA 159839 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945 ||||| | | || |||| || | ||||||||| | || || |||| ||| || Sbjct 159840 GCCATCTGGACGACCGTCCGCTGAGAAATTTCCCAGACTGTCTTGTAAAGAGACTTGATG 159899 Query 78946 TCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 ||| | |||| ||| | | ||||||||||| || || || || || || | ||||| Sbjct 159900 TCTGCGGGAACGTTGGGAATGTTCTGAATGGAGCCGCCTTCGGCAATGATGCGGTTCTTC 159959 Query 79003 ATCTCTTCATTCCATA-----ATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAA 79057 || | || ||| | || | | | ||| || | || || || || | Sbjct 159960 ATGCCATCGGACCAAAGACCCATATCCACGAGGTC----CT-TGAGCAGCCAAGGGTTGA 160014 Query 79058 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCA 79117 | || || || || |||| | || | |||| ||| || || ||| || || || | Sbjct 160015 CGACCTGGAACTCGCCAGCAAGGACACGGCGAGAGTAGATGTTGGAGGTGTAAGGCTCGA 160074 Query 79118 CCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATA 79177 |||| || || |||| || || | || || || |||||||| |||||||| | Sbjct 160075 AACATTCGTTGTTGCCCAGGATCTGGGAGGTACTGGCAGTGGGCATAGGGGCCACCAACA 160134 Query 79178 AACTATTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGA 79236 |||| |||| | ||| | || | |||| | || || || | |||||| |||||||| Sbjct 160135 AACTGTTTCGCACACCATTCTGCT-TGATCTGGTCCTTCAGCGTTTCCCAGTCCCAAAGG 160193 Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGT-TACTAGCGTATGATCC 79295 || ||||| |||||||| | || || || || || || | | | | | || || Sbjct 160194 TCGGACGGCGTGACATTCCACATGTCGTACTGGAGTATGCCCTGTGAGACAGGA-GAGCC 160252 Query 79296 TGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCC 79355 | ||| || || || || ||| | || | ||| | ||| || || | Sbjct 160253 TTCGTAAGTGGAGTATGGGCCCTCCACCTTAGCAATTTCCGAGGACGCTGTCAAGGCAGC 160312 Query 79356 GTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TCAAATG 79414 || || || || ||||| |||| ||| || || | | || ||| ||| | || || | Sbjct 160313 GTGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGTCTAGCCTCT-GGCGACTCGAAAG 160371 Query 79415 GATAATTTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 79473 | | ||| | | || | ||| || | || |||||||| | ||||| || | Sbjct 160372 GC-ATGCGAAGCGCCAAGAAGGTGTCAGCAAGACCCTGAACACCTAGGCCGATGGGACGG 160430 Query 79474 TGTCTCTTATTAGAAATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 79532 |||| | | || | || | || || || | ||| || || || | || || || || Sbjct 160431 TGTCGCATGTT-GCTGTTGCGTGCCTCCGGGACAGGGTAGTAGTTCACGTCGATGATCTT 160489 Query 79533 ATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCC 79592 || || || ||| | || | | || || | || || | || || || || Sbjct 160490 GTTCAGGTTGTGGACGACGACCTGGGTAACTTCGTGAAGCTTCTGGAAGTCGTATACGCC 160549 Query 79593 ATC----TATTACA---AACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCT 79645 || || | || || ||| | | ||||| |||||||| || || || || |||| Sbjct 160550 TTCGTTGTAGTCCACGAAAGATGGT-AGCGCGAGAGATGCCAAGTTGCAGACAGCGACCT 160608 Query 79646 CATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTA 79705 ||| | ||| || | | ||||||||||| ||||| | |||||| || | Sbjct 160609 CATCGGGGGCCGAGTACTCCACAATTTCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGA 160668 Query 79706 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAG 79765 || | || || ||||| ||| || |||||| || || ||||| || | |||| Sbjct 160669 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAG 160728 Query 79766 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA--TTATAGACT 79822 | || |||||| ||| | ||| || | ||| | | || | ||||| | || | ||| Sbjct 160729 TCTCGGTCTGAGCTTCGAGAATGGCATACCACA-GCTTCTGGGCCTTGACCTTCT-GACG 160786 Query 79823 TGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACAT 79882 | | || ||||| | || || |||||||| || || | |||| Sbjct 160787 -GCCGCGGCCCTCAGCCTCGTACTTCTCGTACAAGGCCTCGAACTCATCACCGTAGACAT 160845 Query 79883 CGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTC 79942 || ||| ||||| || |||| || ||||| | | |||||| || | | || || | Sbjct 160846 CGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTCCACTCGCCGTTCTTCTCGACAC 160905 Query 79943 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCT 80002 | ||||| || || || |||||||||||||| | || || || | | | ||||| Sbjct 160906 GCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAGAGGTCGCGAGCACGGATCTCCT 160965 Query 80003 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 80062 | || || ||||| ||||| |||||| | | || ||| || |||||||| |||| Sbjct 160966 CTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAAACATCCGAGTGCCACGGCTCCA 161025 Query 80063 AGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 80122 |||| ||||| | | || || || ||||| || |||||||| | ||||| ||||||| Sbjct 161026 AGTAGATGGCAAAGGCACCAGGCCGCTTGTTGCCACCCTGATCAACATATCTCGCGGTGT 161085 Query 80123 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATAT 80182 | || | || | | ||| || | ||||||||||| || || || || |||| ||| | Sbjct 161086 TGTTGAAGACACGGAGCATAGGGACGATACCATTGGACGTTCCGTTAGTACCGGCGATGT 161145 Query 80183 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 80242 | ||| ||||||||||| | || | ||| || || || ||||| || |||| Sbjct 161146 ACGAGCCAGTGGCACGAATACGATGGATATTCAAACCGATACCACCGGCCATCTTGGAGA 161205 Query 80243 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAA 80302 | | || || ||| | ||||| ||||| ||||| ||||||||||| |||| | | Sbjct 161206 TCATAGCACAAGTTTTCAGGGTATCGTAGATACCCTCGATGCTATCATCCTTCATATCGA 161265 Query 80303 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 80362 || || ||| || | || || || || || || || | ||| || || | Sbjct 161266 CAAGGAAGCAGGATGAAAGCTGCGCCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGG 161325 Query 80363 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 80422 | || || || |||| |||||| || ||||| |||||||| | |||| || | Sbjct 161326 CATGAGTGAAGTATTTGCCAGACATGAGGTTGTAGGTCTCAATGAC--CTTCTCTA---C 161380 Query 80423 ATTGATGA------ATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 80476 |||| | | || || || || |||||||| | ||||||||| ||||| || |||| Sbjct 161381 ATTG-TCACCCCAGATACCGACAGCAACACGCATAATCATGTGCTGCGGTCTCTCGACGA 161439 Query 80477 TCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 80536 ||||| || | |||| | ||| || |||||||| || || || || || | || Sbjct 161440 TCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTCCAAAGTCTTGAAGCCGAAGTATTGGT 161499 Query 80537 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTA 80596 | |||||||| || || | |||| | |||| || | ||||| | | | |||| | Sbjct 161500 AGTTGAAGTCTCGGTCATAGACAATAGCAGAGTCGAAATCCTCCTTGTGTCTCATAAC-A 161558 Query 80597 CATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655 || ||| | || | ||| || || || || |||||| | || || |||||| Sbjct 161559 CAATCATACGTCTCCTGGGCAATCATGGGGGATGCCTTGCCATTTCTGGGGTTGACATAG 161618 Query 80656 TTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGA 80714 | | | | || | || || | || | || ||||| | |||||| || ||||| Sbjct 161619 TGGTAGAGGTCACTGACGAC-AGACGACCATTGCTTCTTTGTCTGCTTGTGGAGGTTTGA 161677 Query 80715 TACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||||| || | ||||| | |||||||| || || || Sbjct 161678 CACGGCGATACGTGCGGCGAGGATGGCATAGTCAGGGTG 161716 >seq1 Length=3626568 Score = 104 bits (114), Expect = 3e-17 Identities = 153/216 (71%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || ||||| ||| |||||| |||||||| | || || |||||||| Sbjct 1873507 AACAGCAGGCAGGCGAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAG 1873448 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || |||||||| ||||| ||||| || ||||| || |||||||| || | || Sbjct 1873447 AAGGTCAGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAAGGCGCCG 1873388 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT- 50129 |||||||| || || || ||||| ||||| | || | || || | ||| | Sbjct 1873387 CTGAAGAAGATACCCTCGACGGCGGCGAAGGCGATCAGGCGCTGGGCAAAGGTGGACTTC 1873328 Query 50130 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTC 50163 ||| |||||||| | ||||||||||||||| Sbjct 1873327 CGGTCGGTAATCCACTTCAGGGCCCAATCGGCCTTC 1873292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267902164000