Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq36 89.7 5e-13 >seq36 Length=1467843 Score = 89.7 bits (98), Expect = 5e-13 Identities = 201/289 (70%), Gaps = 16/289 (6%) Strand=Plus/Plus Query 99489 CGCG-TGCACCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCC-CGCTCCGC 99546 |||| ||| ||| ||| ||||||| | | ||||||||| | | | ||| |||| Sbjct 213498 CGCGCTGCGTCAGGCGCTCCCAGCCGCGCCGCGCGTGCGAGTTGGCCTCGTGCGC-CCGC 213556 Query 99547 ACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAG 99603 || || || | |||||||||| ||||||||||| |||||| ||| || ||| | | Sbjct 213557 ACCGTCAGGCACGTGTTGAGCATGAGCACGCCGCGCTCCGCCCAGGGCGTCAGCAGCCCG 213616 Query 99604 CCG-TGCTGCG----GCCGCGGGGTC-CCGGGGAAGTTCTTCTGCACGGCCGCGTAGATG 99657 ||| || || | |||||| || | ||| ||| ||| ||| || ||| ||| Sbjct 213617 CCGTTGTTGGGCGGCGCCGCGAACTCGTCCGGGTAGTCCTTGCGCAGCGCGATGTACATG 213676 Query 99658 TTCTGGAGGCTGGGCGGGATCGGAACG-CCGCGG-TTCACGCTGAAGGCCAGGCCGTGGG 99715 |||| ||| ||||| ||| || | |||| ||| ||| ||||| ||||| | Sbjct 213677 TTCTTGAGCGACGGCGGCGCCGG--CGTCGGCGGCCGCACCGAGAACGCCAGCCCGTGCG 213734 Query 99716 CCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 |||| |||| ||||||| |||||||| |||||||| ||| |||||| Sbjct 213735 CCTGGTTGTGGTTGTGGTACGGGTCCTGCCCCAGGATCACGCACTTGAC 213783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440898648876000