Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq21 100 7e-16 seq47 89.7 1e-12 >seq21 Length=521316 Score = 100 bits (110), Expect = 7e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| | || | |||||| || || || || ||||| ||| Sbjct 162953 TCCTTCTGGATGTTGTAGTCGCTCAACGTACGACCGTCCTCCAGCTGCTTACCAGCGAAA 163012 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATT 104487 || || | ||| ||||| || || || ||||| || ||||||||| ||||| || ||||| Sbjct 163013 ATGAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAATC-TTGCTCTTCACATT 163071 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||| || | || ||||| || || || ||||| || ||||| || || || Sbjct 163072 GTCGATGGTGTCCGATGACTCAACCTCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGAC 163131 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 163132 GAAGATCTGCAT 163143 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| || ||||| || || |||| || || Sbjct 163387 AAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCATC 163446 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||| || || | | ||| || || ||||| || || || || || Sbjct 163447 CTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 163506 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||||| || || || || | ||| ||| | || ||||| || || || || Sbjct 163507 CTGAATCTTTGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCGAGGGTGATCGT 163566 Query 104527 CTTACCAGTAAGTGTTTTTAC 104547 ||| || || || || || || Sbjct 163567 CTTTCCGGTCAGGGTCTTGAC 163587 >seq47 Length=1462733 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||| || || ||||| || || |||| || || || || || || || || ||||| Sbjct 1313785 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 1313726 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||| || || ||||| || || || || ||||||||||| | || ||||| || Sbjct 1313725 AGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCG 1313666 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | ||| ||| | || ||||| || || || ||||| || || || || || || || Sbjct 1313665 ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1313607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396924770800