Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq13 118 9e-22 >seq13 Length=657772 Score = 118 bits (130), Expect = 9e-22 Identities = 179/252 (71%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||||||| ||||| ||||| ||||| | | | || || || || ||||| | Sbjct 424898 GCCCGTGCTGCCGAAGCCGCCGGCGCCGCGCACGCTCTCCTCGAGCTCGGCGACCTCGAC 424839 Query 5563 CACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTA 5621 || |||||| | || ||||||| || ||||| || | ||||||||| | Sbjct 424838 GACGTCGGGGGT-GTAGATGCGCTCGACGACGAGCTGGGCGACGCGGTCGCCCTCGGCGA 424780 Query 5622 CCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGG 5681 | |||| ||| | |||| ||||||||||| ||| ||| ||| |||||||||| Sbjct 424779 CGGCGAAGTCGGCCTCGCCGTGGTTGAACAGCAGCACCTTGACGGGGCCCCGGTAGTCGG 424720 Query 5682 CGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAG 5741 |||| ||||||||||| ||| ||||||||||||||| |||||| ||||| || || | Sbjct 424719 CGTCGATCACGCCCGCCCCCGTGTCGATGAAGTGCTTCGACGCCAGCCCGGACCGCGGGG 424660 Query 5742 CCACGCGGCCGT 5753 | | |||||||| Sbjct 424659 CTATGCGGCCGT 424648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053875871200