Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq66 114 9e-21 >seq66 Length=76900 Score = 114 bits (126), Expect = 9e-21 Identities = 155/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 25382 CAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATC 25441 ||| ||||| ||| | ||||| | ||||||||| ||||||||| || ||||| || Sbjct 25382 CAGCGTGGGGAAGTCGCGCGGCTCGCGCTCGAGCTGGATCTTCAGCGCGTCCACGTGGTC 25323 Query 25442 CAGGTAGACGTGAGCGTCTCCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAA 25500 ||||||||| ||||| |||| ||| | || || |||||| | ||| || | Sbjct 25322 GCAGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCT-TCCCGGCACCAGCTCGCATA 25264 Query 25501 CGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACC 25560 ||| || ||||||| ||| || || ||||||||||||||| ||||| || || | | Sbjct 25263 CGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAAGGGGACGCCCAGGC 25204 Query 25561 CCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 |||||| | | |||| |||||| |||||||| Sbjct 25203 CCATGT-CGCAGGACCGCTGGTACAGCTGACA 25173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137185457300