Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq15 398 2e-105 >seq15 Length=644973 Score = 398 bits (440), Expect = 2e-105 Identities = 1172/1787 (66%), Gaps = 36/1787 (2%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA--TCAATGGTGATATTGTTG 363448 ||||| | ||||| ||||| |||||||| ||| | | || |||| | || || | Sbjct 161491 TTCGGCTTCAAGACTTTGGAGCGGTCCTACCT-TCT-GAAGCTCGATGGCAAGATCGTCG 161434 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 | | |||||||| ||| | |||||||||||| | |||||| | |||| || Sbjct 161433 AGAGACCGCAGCACATGATTATGCGTGTTGCTGTCGGTATCTGGGGTGACAATGTAGAGA 161374 Query 363509 CCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACGCCACGCCAACA 363567 | ||||| || || || || | || | || ||||| || ||| | ||||| Sbjct 161373 AGGTCATTGAGACCTACAACCTCATGTCTGG-CAAATACTTCACTCATGCCTCCCCAACC 161315 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 | | ||| ||||| || | | | | ||| | || || ||||| ||| | | |||||| Sbjct 161314 CTTTTCAACGCTGGTACACCTCAGGCGCAGCTTTCATCCTGCTTCCTTGTCGATATGAAG 161255 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 || ||| |||||||||||||| || || || || | ||||||| | || ||||||| Sbjct 161254 GATGATAGCATCGAGGGTATCTACGATACCCTGAAAACTTGTGCTATGATCTCCAAGATG 161195 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACATTCGCGG 363746 || || || || ||| | ||||| | |||||| ||| | | ||||| ||| Sbjct 161194 GCCGGTGGTATCGGTTTGAATATCCATCGTATTCGTGCCACTG-GCTCGTACATCGCCGG 161136 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || ||| || ||||| | || || ||||| ||||| || |||| || ||||| Sbjct 161135 TACTAACGGAACGTCCAATGGTATCGTCCCTATGCTCCGTGTCTTCAACAACACCGCGAG 161076 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || || || |||||||| ||||| || || ||||| || || | ||||| Sbjct 161075 ATATGTTGATCAGGGTGGCAACAAGCGGCCTGGTGCCTTTGCCATCTACTTGGAGCCGTG 161016 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| |||| ||||| ||||| ||||| || ||| || |||||||| | || Sbjct 161015 GCACTCGGATGTTTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGATCCG 160956 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| || || || ||| ||| |||||| || | |||| ||| |||||||| || ||| Sbjct 160955 TGCTCGCGACCTCTTCCTTGCTCTTTGGATTCCCGACCTTTTCATGAAGCGTGTCGAG-- 160898 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | | ||| | ||| | ||||| |||| || || || || ||||||| | Sbjct 160897 AAGAACGGCGAGTGGACTCTCATGTGCCCGAACGAGTGCCCTGGCCTAGCCGATGTCTAC 160838 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 ||||| || | | || | ||||| ||||| || | ||||| | ||| ||| Sbjct 160837 GGTGATGAGTTCGAGGCCTTGTACGAGAAGTACGAGGCTGAGGGCCGCGGCCGTCAGAAG 160778 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | || |||||||| |||| |||||| | || | |||| ||||| || | ||| Sbjct 160777 GTCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAAGCTCAGACCGAGACTGGCAACCCC 160718 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||| ||| |||||||||||| ||||||| || |||| || || ||| Sbjct 160717 TTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATT 160658 Query 364225 CAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| | ||||| || || || ||| | || ||| | || ||||| ||| || || Sbjct 160657 C-GCAGCTCAAACCTGTGCACTGAAATTGTGGAGTACTCGGCCCCCGATGAGGTCGCTGT 160599 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTGA 364337 || ||| | || || ||||||| || | || || || || || | || Sbjct 160598 CTGCAACTTGGCATCTCTCGCGCTACCATCTTTCGTGGACTACAACGAAGGCGTATACGA 160539 Query 364338 CCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATC 364395 | |||| | ||| | || || ||| | || | | | ||| || ||||| | ||| Sbjct 160538 CTTCCAGAAGCTTCACGAAGTTACCCAGGTCGTCGTCC--ACAACCTGAACAAGATCATC 160481 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCC 364450 ||| ||| || || || | || || || || ||| || ||||| || || | Sbjct 160480 GACGTGAACTACTACCCTGTCCCGGAGGCACGCAACAGC-----AACATGCGACACCGTC 160426 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510 | || || || ||||| ||||| || |||||| || || ||| ||| | || | Sbjct 160425 CCATCGGCCTAGGTGTTCAGGGTCTTGCTGACACCTTCTTGGCGCTTCGCATGCCTTTCG 160366 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570 | ||||| || ||| | || || ||| ||||||| || ||||| || || || Sbjct 160365 AGTCGCCAGAGGCTAGACAGCTGAACAAGCAGATCTTCGAGACAATCTACCACGCTGCCT 160306 Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 |||| || || | || | || || |||| ||||| ||||| || || || | Sbjct 160305 TGACAGCGTCCTCGGAAATTGCTAAGGTGGAGGGCCCATACTCCACTTACGAAGGCTCTC 160246 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 || | || ||||| | | |||||| || | |||||||||||||| || | || ||| Sbjct 160245 CTGTCTCACAGGGCATACTCCAGTACGACATGTGGAATGTCACGCCGTCCGACCTTTGGG 160186 Query 364691 ACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA 364749 ||||||| ||||| | | || | | ||| || ||||| || ||| | | Sbjct 160185 ACTGGGAAACGCTGAAGGACC-AGATCAAGCAGAATGGTGTGCGAAACAGTTTGTTGGTG 160127 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || |||||||| || ||| | |||||||| || |||||||| || ||||| || Sbjct 160126 GCCCCTATGCCCACTGCCAGTACCTCCCAGATCCTGGGCAACAACGAATGTTTCGAGCCT 160067 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||| | || || ||||| || ||| | || || || | ||| || || Sbjct 160066 TACACCTCCAACATCTACTCTCGCCGTGTCCTTGCTGGCGAGTTCCAGGTCGTCAACCCT 160007 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | || ||||||| || || || || ||| || ||||||||||| ||| Sbjct 160006 TGGCTGCTCAAGGACCTCGTGGATATGGGTCTTTGGTCCGATGGCATGAAGAACCGCATC 159947 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 || |||| || || | ||||||||||| |||| | ||| | ||| || || Sbjct 159946 ATTGCCGAAGGCGGCTCCATTCAGAACATTCCCAACGTTCCCGCAGACATCAAGTCTCTT 159887 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 ||||| || || ||||||||||| ||| || || | | ||||| ||||| || || Sbjct 159886 TACAAGACAGTCTGGGAAATTTCTCAGCGGACGGTCGTCCAGATGGCTGCCGACCGTGGC 159827 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 || || || ||| |||||| | ||| | |||| | |||| ||| | |||| Sbjct 159826 GCATTCATTGACCAGTCTCAGTCGCTGAACATTCACATGCGTGAGCCTACCATGGGCAAG 159767 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || |||||| ||| || ||||| |||||| ||||| || Sbjct 159766 ATCACCAGCATGCACTTCACTGGTTGGAAGCTCGGTCTCAAGACGGG 159720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351930078200