Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq47 95.1 1e-14 seq72 84.2 2e-11 >seq47 Length=1462733 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| || ||| | |||||||||||| | ||||| |||||| ||| Sbjct 1313634 ATCACCCTCGAGGTGGAGTCGTCCGACACCATCGACAATGTCAAGTCGAAGATTCAGGAC 1313693 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| ||||| || || ||| | ||||||| || ||||||||| ||||| ||| Sbjct 1313694 AAGGAGGGCATCCCTCCGGACCAGCAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGAT 1313753 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| | || ||| || ||||| || || Sbjct 1313754 GGCCGAACCCTCTCCGACTACAACATCCAGAA 1313785 >seq72 Length=40277 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| |||| || ||| | | | Sbjct 18879 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC 18820 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || ||||| ||||| || || Sbjct 18819 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 18760 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||||| || ||||||||| ||||| || | | | | | || || || ||| Sbjct 18759 CAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCTCGGACTACAAC 18700 Query 24171 ATTCAAAAAGA 24181 || || || || Sbjct 18699 ATCCAGAAGGA 18689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935476015500