Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq15 163 3e-35 seq1 134 1e-26 seq72 122 8e-23 seq21 116 3e-21 seq47 98.7 9e-16 >seq15 Length=644973 Score = 163 bits (180), Expect = 3e-35 Identities = 608/937 (65%), Gaps = 22/937 (2%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | ||||| || | || | ||| || ||| | || Sbjct 160011 TTGACGACCTGGAACTCGCCAGCAAGGACACGGCGAGAGTAGATGTTGGAGGTGTAAGGC 160070 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| | ||||| ||||||||||| || | ||| | || |||||||| |||||| Sbjct 160071 TCGAAACATTCGTTGTTGCCCAGGATCTGGGAGGTACTGGCAGTGGGCATAGGGGCCACC 160130 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || || || |||| || | || |||||| | ||||| ||||| |||| ||||| Sbjct 160131 AACAAACTGTTTCGCACACCATTCTGCTTGATCTGGTCCTTCAGCGTTTCCCAGTCCCAA 160190 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | |||| | || | ||||||||||||||| | ||||||| | | || | Sbjct 160191 AGGTCGGACGGCGTGACATTCCACATGTCGTACTGGAGTATGCCCTGTGAGACAGGAGAG 160250 Query 145298 CCTT-GAAAG-GAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | ||| | | ||| |||| || || | || | ||| || | Sbjct 160251 CCTTCGTAAGTGGA--GTATGGGCCCTCCACCTTAGCAATTTCCGAGGACGCTGTCAAGG 160308 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGC-TCTCG 145414 | || || ||||||||| || ||| |||| ||| | | || || | || |||| Sbjct 160309 CAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGTCTAGCCTC-TGGCGACTCG 160367 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | |||||||| ||| | || | || || || ||||| | || | ||||||||| Sbjct 160368 AAAGGCATGCGAAGCGCCAAGAAGGTGTCAGCAAGACCCTGAACACCTAGGCCGATGGGA 160427 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAAT 145533 || ||| ||||||||| | | ||| | || ||| || | | | || |||||| || Sbjct 160428 CGGTGTCGCATGTTGCTGTTGCGTGCCTCCGGGACAGGGTAGTAGTTCAC-GTCGATGAT 160486 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC--AAAC 145591 || |||| ||| | || || |||| |||| | | | ||| | ||||| | || Sbjct 160487 CTTGTTCAGGTTGTGGACGACGACCTGGGTAACTTCGTGAAGCTTCTGGAAGTCGTATAC 160546 Query 145592 CGAGCC-TCGTCAACGACCAC-ACAGCTATTGACGGCGATCGACGCCAAATTACAAACTG 145649 ||| |||| | |||| | || | | | |||| || ||||| || || || | Sbjct 160547 ---GCCTTCGTTGTAGTCCACGAAAGATGGT-AGCGCGAGAGATGCCAAGTTGCAGACAG 160602 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGA 145706 | ||| |||| | | ||| | || || || | ||||| || ||| | | Sbjct 160603 CGACCTCATCGGGGGCCGAGTACTCCACAATTTCAGTGCACAGGTTTGAGCTGC---GAA 160659 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766 |||| || || || | ||| || || || | |||||| ||||||||||||||| | | Sbjct 160660 TGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGG 160719 Query 145767 GTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCT 145826 | ||||||||| ||| | || | || | || | ||| || |||| Sbjct 160720 GGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGGGCCTTGACCT 160779 Query 145827 GCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 ||| || ||||||||| | ||||| ||| ||| | |||| ||| | ||||| Sbjct 160780 TCTGACGGCCGCGGCCCTCAGCCTCGTACTTCTCGTACAAGGCCTCGAACTCATCACCGT 160839 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 || ||||| ||||| || |||| ||| || ||||| || | ||| ||||||| | Sbjct 160840 AGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTCCACTCGCCGTTCTTCT 160899 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGC 145983 ||| |||| ||| || | || || | ||| || || Sbjct 160900 CGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGC 160936 >seq1 Length=3626568 Score = 134 bits (148), Expect = 1e-26 Identities = 341/511 (67%), Gaps = 7/511 (1%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 || ||| | ||| ||| |||| ||||| |||||||||| | | | | | | || Sbjct 1873278 CCCTGCATTCGCCGGAAGGCCGATTGGGCCCTGAAGTGGATTACCGACCGGAAGTCCACC 1873337 Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 || ||| |||| || | ||||| || || ||||| |||| || ||| || Sbjct 1873338 TTTGCCCAGCGCCTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCGCCTTC 1873397 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 || ||||||| | | || | ||| | |||||||||||||| || ||||||| Sbjct 1873398 GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAG 1873457 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGC 46326 || || |||||||||||||||||||| || ||||| || || || || | | | | | Sbjct 1873458 CTCATCTCGCGCGACGAGGGCCTGCACACCGACTTCGCCTG--CCTGCTGT-TCTCGCAC 1873514 Query 46327 GTGCACGACAAGCTTGCGC-CCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCAT 46385 || | || || | || || | ||| | || | ||| || || |||| || Sbjct 1873515 CTG-AAGAACCGCCCGAGCAAGGAGATCGTCCAGAAGGTCATCACCGATGCCGTGGAGAT 1873573 Query 46386 TGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTC 46445 ||| ||||||| | || | || |||||| |||||||| ||||||||||| | Sbjct 1873574 CGAGCAGGAGTTCCTCACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCAACCT 1873633 Query 46446 AATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC-CGA 46504 ||| | ||||||||||| || || ||||| |||||||| | | || || | | Sbjct 1873634 CATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGT-CGCCCTCGGCAACGACA 1873692 Query 46505 AGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAA 46564 || | | | | ||| || || || || ||| | |||||||| || | ||||| | Sbjct 1873693 AGGTCTACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGA 1873752 Query 46565 CTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | || || ||||| ||||||||||||||||| Sbjct 1873753 CCAACTTCTTCGAGAAGCGCGTCGGCGAGTA 1873783 >seq72 Length=40277 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| ||||| || | || | ||| |||||| || |||||||| || Sbjct 18652 GCCTCCGCGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 18711 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| ||||||||||| ||| | || | |||||||||||||||||| Sbjct 18712 GAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGG 18771 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 18772 GATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCCAC 18831 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| ||| | || || || || || || || ||||| |||||||||| Sbjct 18832 CTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 18881 >seq21 Length=521316 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | ||| |||||||| ||||||||||| ||| Sbjct 163373 CCACCGCGGAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAA 163432 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| |||| || ||||||||||| ||||| Sbjct 163433 AGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 163492 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || ||||| | || | || |||| |||||| | Sbjct 163493 ATGCCCTCCTTGTC-CTGAATCTTTGACTTGACGTTGTCAATGGTGTCGGAGGACTCAAC 163551 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| ||| | || || ||||| || || || |||| Sbjct 163552 CTCGAGGGTGATCGTCTTTCCGGTCAGGGTCTTGACGA 163589 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| || || | || | ||| |||||| || |||||||| || Sbjct 163652 GCCACCACGCAGACGGAGGACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGA 163711 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| || |||| | ||| |||||||| || || Sbjct 163712 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGCGG 163771 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | || | ||| || | |||||||| Sbjct 163772 AATGCCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGGACTCGAC 163831 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || ||||| || ||||| |||||||| Sbjct 163832 CTCCAGGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATCTGCAT 163879 >seq47 Length=1462733 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||| || ||||| ||||||||||| ||| | | Sbjct 1313787 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 1313728 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||||||||| || || ||||| || ||| ||||| | | Sbjct 1313727 TCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGT 1313668 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||| | |||| ||| | ||| || || || || || || |||| Sbjct 1313667 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1313608 Query 131225 AA 131226 || Sbjct 1313607 AA 1313606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012209984000