Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq81 140 2e-28 seq21 89.7 3e-13 >seq81 Length=10955 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5379 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5438 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5439 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5473 >seq21 Length=521316 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| ||||| || || ||||||||||| || || ||||| || | Sbjct 162917 CCACCACGGAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 162976 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || ||| |||| || | || || || || || || || || || ||||| | ||| Sbjct 162977 AACGTACGACCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGA 163036 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| ||| || ||||||||| | || || || ||||| Sbjct 163037 ATGCCTTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATGGTGTCCGATGACTCAACC 163096 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || ||||| | || || ||||| |||||||| Sbjct 163097 TCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGACGAAGATCTGCAT 163143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946791783100