Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq21 120 3e-22 seq72 107 2e-18 seq47 107 2e-18 >seq21 Length=521316 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || ||| | || || || || |||| || || || || || Sbjct 163882 AAGATGCAGATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCCTGGAGGTCGAGTCC 163823 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| | |||| ||| || || ||||||||||| ||||| ||||| Sbjct 163822 TCGGACACTATCGACAACGTCAAGTCAAAGATCCAGGACAAGGAGGGCATTCCGCCCGAC 163763 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || |||||||| || ||||| ||||| ||| | |||||| ||||||| |||| || ||| Sbjct 163762 CAGCAACGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTAC 163703 Query 22396 AACATTCAAAAAGA 22409 ||||| || || || Sbjct 163702 AACATCCAGAAGGA 163689 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || ||| |||| || || || || || |||| ||| | ||| | |||| | Sbjct 163575 ACCGGAAAGACGATCACCCTCGAGGTTGAGTCCTCCGACACCATTGACAACGTCAAGTCA 163516 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| ||||| || || || | || || || || || Sbjct 163515 AAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGATTGATCTTCGCTGGTAAG 163456 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||| ||| | ||||| ||||||||||| || || |||||| | || Sbjct 163455 CAGCTCGAGGATGGCCGAACCCTTTCCGACTACAACATTCAGAAGGAGTCCACCCTCCAC 163396 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | ||| | || | ||||| ||| Sbjct 163395 CTCGTTCTTCGTCTCCGCGGTGGT 163372 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| ||||| || || | | Sbjct 163371 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 163312 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||||| || |||||||||||||| || ||||| ||| Sbjct 163311 GATACCATCGACAACGTGAAGAGCAAAATCCAGGACAAGGAGGGTATCCCGCCCGACCAA 163252 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || ||||| || ||||| ||||| ||| || | ||| |||||| Sbjct 163251 CAGCGACTTATCTTCGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTAAGCGACTACAAC 163192 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 163191 ATCCAGAAGGAATCGAC 163175 >seq72 Length=40277 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || ||||| | | | Sbjct 18879 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC 18820 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| || || || || || Sbjct 18819 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 18760 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||| ||| |||| || |||||| Sbjct 18759 CAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCTCGGACTACAAC 18700 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||| | || | || |||| |||||||||| Sbjct 18699 ATCCAGAAGGAGAGCACCCTCCACCTGGTCCTGCGCCTGCGCGGAGG 18653 >seq47 Length=1462733 Score = 107 bits (118), Expect = 2e-18 Identities = 137/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 22221 GCAAAT--TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| ||| || || || | || || || || |||| || || ||||| | || Sbjct 1313598 GCAAATAGTTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 1313657 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| ||||||||||| || || || || || Sbjct 1313658 GACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 1313717 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | |||||| ||| ||| ||||||| |||||| Sbjct 1313718 CAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAAC 1313777 Query 22399 ATTCAAAA 22406 || || || Sbjct 1313778 ATCCAGAA 1313785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727488456500