Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq21 111 1e-19 >seq21 Length=521316 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||||| |||||| || || || || ||||||||| | Sbjct 162953 TCCTTCTGGATGTTGTAGTCGCTCAACGTACGACCGTCCTCCAGCTGCTTACCAGCGAAA 163012 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||||||||| || ||||| ||||||||||| ||||| |||||| || | | Sbjct 163013 ATGAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAATCTTGCTCTTCACATTG 163072 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||| | || || || |||| || | || || || || ||||| || || Sbjct 163073 TCGATGGTGTCCGATGACTCAACCTCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTGACG 163132 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 163133 AAGATCTGCAT 163143 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| | || | || || || || ||||||||||| ||| Sbjct 163370 ATACCACCGCGGAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCG 163429 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || ||||||||| |||| | ||||| ||||| ||| Sbjct 163430 GAAAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGA 163489 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||||| || | | |||| |||||||| ||| || Sbjct 163490 GGAATGCCCTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCGGAGGACTCA 163549 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | ||| || |||||||| || || || Sbjct 163550 ACCTCGAGGGTGATCGTCTTTCCGGTCAGGGTCTTGAC 163587 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | || | ||| ||||| || || |||||||| ||| Sbjct 163142 ATACCACCACGGAGCCGGAGAACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCG 163201 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || || || | || ||||| ||| |||| || ||||||||||| || Sbjct 163202 CTTAGCGTTCGGCCGTCCTCCAACTGCTTACCGGCGAAGATAAGTCGCTGTTGGTCGGGC 163261 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| || || || | | || | ||| || | || ||| Sbjct 163262 GGGATACCCTCCTTGTCCTGGATTTTGCTCTTCACGTTGTCGATGGTATCCGACGACTCG 163321 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||||||||| || || || || |||||||| Sbjct 163322 ACCTCAAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 163371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133887961200