Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 123 5e-23 >seq1 Length=3626568 Score = 123 bits (136), Expect = 5e-23 Identities = 261/388 (67%), Gaps = 6/388 (2%) Strand=Plus/Plus Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412 ||||||| |||||| ||| || ||||||| ||||| | || |||||| ||| Sbjct 1873402 CCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCA 1873461 Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGA 243472 || |||||||||||||| ||| | |||| || ||| || || || || Sbjct 1873462 TCTCGCGCGACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTGTTCTC---GCACCTGA 1873518 Query 243473 ACAAGCTACCATTC---GAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAA 243529 | || | || | || | ||| | | ||||||| || || || || | ||| Sbjct 1873519 AGAACCGCCCGAGCAAGGAGATCGTCCAGAAGGTCATCACCGATGCCGTGGAGATCGAGC 1873578 Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 |||| ||| | ||| || | || ||| || | ||||||||| | | |||||| Sbjct 1873579 AGGAGTTCCTCACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATGA 1873638 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 ||||||||||| ||||| ||||||||| | || |||| || || | || || || | Sbjct 1873639 AGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGACAAGGTCT 1873698 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 || ||||| |||||||| | ||| |||||| ||| ||||| || || || |||| Sbjct 1873699 ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACT 1873758 Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||||| ||||| ||| | || || || Sbjct 1873759 TCTTCGAGAAGCGCGTCGGCGAGTACCA 1873786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878586935000