Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq15 228 1e-54 seq7 91.5 2e-13 >seq15 Length=644973 Score = 228 bits (252), Expect = 1e-54 Identities = 943/1461 (65%), Gaps = 55/1461 (4%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| ||||| ||||| || || || ||||| |||| ||| |||| ||| | Sbjct 160050 TAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAGGATCTGGGAGGTACTG 160109 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || |||| | | ||||| || | ||| || | | | || | ||| Sbjct 160110 GCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATTCTGCTTGATCTGGTCC 160169 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGG 114118 || || | |||||||| | || | | | | | | |||||| || ||||| Sbjct 160170 TTCAGCGTTTCCCAGTCCCAA---AGGTCGGACGGCGTGACATTCCACATGTCGTACTGG 160226 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 || || || || ||| | || || || || | || |||||||||||| |||| || Sbjct 160227 AGTATGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTTAGCA 160286 Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT- 114237 | ||| ||| ||| | ||| ||||| || |||||||| || || | |||| Sbjct 160287 ATTTCCGAGGACGCTGTCAAGGCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTTCAGC 160346 Query 114238 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGA 114295 || || | |||| || || || | | || || | || | | || || ||| Sbjct 160347 TGTCTAG-CCTCTGGCGACTCGAAAGGCATGCGAAGCGCCAAGAAGGTG--TCAGCAAGA 160403 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC--- 114352 || || ||||| ||||| || || || |||| ||| || || || || |||| Sbjct 160404 CCCTGAACACCTAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGTGC---CTCCGGG 160460 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || || || | ||| ||||| | | | || || || | | ||| |||| || | | Sbjct 160461 ACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGGACGACGACCTGGGTAACT 160520 Query 114413 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGGAAGG- 114469 || |||||||| | | | || | || |||| ||| | || | || || Sbjct 160521 TCGTGAAGCTTCTGGAAGTCGTATACGC------CTTCGTTGTAGTCCACGAAAGATGGT 160574 Query 114470 ---GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 114526 |||| || |||| || || |||| | |||||| | | |||||| | |||| Sbjct 160575 AGCGCGAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACTCCACAATT 160634 Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586 || || |||| ||||| || ||||||||| | |||||| || || ||| ||| Sbjct 160635 TCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 160694 Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646 || ||||||||| |||||| | || | || ||||| || || | | |||||| || Sbjct 160695 CAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGCA 160754 Query 114647 TTCCAGA-CATCGGCGGCTGGCACAG-TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 114704 | ||| | | || | | || | | || || | | || ||||| |||||||||| Sbjct 160755 TACCACAGCTTCTGGGCCTTGACCTTCTGACG--GCCGCGGCCCTCAGCCTCGTACTTCT 160812 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 114764 ||| | ||| || ||||| ||||| | | || | || || || || | |||| Sbjct 160813 CGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGC 160872 Query 114765 AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGA 114824 | | ||||| ||| | || || ||| |||||||||||||| ||||| || ||||| | Sbjct 160873 ACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAA 160932 Query 114825 GAGCTGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 |||| |||||| || ||| || || | || || | || || || ||| | || Sbjct 160933 GAGCAAGGAAGAGGTCGCGAGCACGGATC-TCCTCTTTACCGTGGTTCTTACGGAGATCA 160991 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTT 114939 | || || | | ||||| ||||||||| |||| ||| | || | | ||| || Sbjct 160992 AGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGC 161051 Query 114940 ACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | | ||| |||| | ||||| ||||| ||| || || || || ||||| || | Sbjct 161052 TTGTTG-CCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGAC 161110 Query 115000 GATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCA 115057 |||||||| || || || || || ||| |||||| | | |||| | | | | Sbjct 161111 GATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAGCC--AGTGGCACGAATACGA 161168 Query 115058 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117 ||||| | || ||| ||||| || ||| ||| ||||| || || | || | Sbjct 161169 TGGATATTCAAACCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTA 161228 Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177 ||||||| || ||||| ||| |||| | ||| |||||||||| || | || Sbjct 161229 TCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGC 161288 Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GG 115235 | | ||||||||||||||||| |||||||| | || || |||| || ||| | Sbjct 161289 GCCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAA-GTA-TTTGCCAG 161346 Query 115236 ACATCTTATCGTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCG 115292 |||| | ||||||||| | ||| | | |||| ||| | ||||||| | Sbjct 161347 ACATGAGGTTGTAGGTCTCAATGACCTTCTCTACATTGTCACCCCAG---ATACCGACAG 161403 Query 115293 AGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGT 115352 || ||||||| ||||| || ||| | || | | | ||||||||| || | |||| Sbjct 161404 CAACACGCATAATCATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGT 161463 Query 115353 AACTCTTCTCCAAGGTCTTGA 115373 | | |||||| ||||||| Sbjct 161464 AGGACCGCTCCAAAGTCTTGA 161484 >seq7 Length=944196 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 10960 ACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT-TGATTTTCACGGGCAACTT 11018 ||||| ||||||||| ||||| ||||| | ||| || ||| || | || || || Sbjct 473353 ACCGATGGCGTCAATCTCATCAATGAATATGATGCAGGGTGTGTGTCTC-CGTGCCGTGG 473411 Query 11019 CAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGG 11078 | |||| |||||||||| |||||||||||||||||||| ||||| || | | Sbjct 473412 CGAAGAGGTCTCGGACTCGGGACGCACCGACACCCACAAACATCTCCACGAATTCCGAAC 473471 Query 11079 CG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11137 || || | || ||| || || || || |||||| |||| ||||| | ||| Sbjct 473472 CGCTCACGCT-GAAGAATGGTACTCCTGACTCGCCCGCGGTGGCCTTCGCGAGCAACGTC 473530 Query 11138 TTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 || ||||| ||||| ||| || || | |||||||| || ||| ||||||| Sbjct 473531 TTACCCGTTCCAGGCGGCCCAGCAAGGATTGCACCACGCGGAATCTTGGCACC 473583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352853308000