Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq15 260 1e-64 >seq15 Length=644973 Score = 260 bits (288), Expect = 1e-64 Identities = 1088/1683 (65%), Gaps = 62/1683 (4%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||| ||||| ||| ||||| || ||| | |||||| Sbjct 161503 AACTACCAATACTTCGGCTTCAAGACTTTGGAGCGGTCCTACCTTCTGAAGCTCGATGGC 161444 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | | |||| ||||||| || || | ||||| || || |||| || || || Sbjct 161443 AAGATCGTCGAGAGACCGCAGCACATGATTATGCGTGTTGCTGTCGGTATCTGGGGTGAC 161384 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 | | ||| || | | | | || |||| | ||| | || |||| | Sbjct 161383 AATGTAGAGAAGGTCATTGAGACCTACAACCTCATGTCTGGCAAATACTTCACTCATG-C 161325 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | |||| ||||| |||||||| || || || | | ||| | || || || ||||| | Sbjct 161324 CTCCCCAACCCTTTTCAACGCTGGTACACCTCAGGCGCAGCTTTCATCCTGCTTCCT--T 161267 Query 93954 GACGAAC--AAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | ||| |||| || |||| || || | ||| | ||| || ||||| | Sbjct 161266 GTCGATATGAAGGATGATAGCATCGAGGGTATCTACGATACCCTGAAAACTTGTGCTATG 161207 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTT 94069 ||||| || || || || ||||| | | | |||| |||| ||||||| || | Sbjct 161206 ATCTCCAAGATGGCCGGTGGTATCGGTTTGAATATCCAT--CGTATTCGTGCCACTGGCT 161149 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | |||||| |||||| || || || ||||| || |||||||||||||||| ||||||| Sbjct 161148 CGTACATCGCCGGTACTAACGGAACGTCCAATGGTATCGTCCCTATGCTCCGTGTCTTCA 161089 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| | ||| | || || || |||||||| | | || ||| | || || ||| Sbjct 161088 ACAACACCGCGAGATATGTTGATCAGGGTGGCAACAAGCGGCCTGGTGCCTTTGCCATCT 161029 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | | ||||| |||||| |||| || | ||| | || || || ||||||||||| | Sbjct 161028 ACTTGGAGCCGTGGCACTCGGATGTTTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTA 160969 Query 94250 ACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 | || ||||| | || | ||||||||| ||||| ||| | || |||||||| | Sbjct 160968 AAGA---GGAGATCCGTGCTCGCGACCTCTTCCTTGCTCTTTGGATTCCCGACCTTTTCA 160912 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || |||||||| ||| || |||| ||| | || || || || || || || | Sbjct 160911 TGAAGCGTGTCGAGAAGAACGGCGAGTGGACTCTCATGTGCCCGAACGAGTGCCCTGGCC 160852 Query 94367 TGTCCGACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG 94424 | |||| || | | ||| | | || || | |||||| | ||||| | |||| Sbjct 160851 TAGCCGATGTCTACGGTGAT-GAG-TTCGAGGCCTTGTACGAGAAGTACGAGGCTGAGGG 160794 Query 94425 -CAAGGCC--AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACA 94481 | |||| |||||| | | || |||||||||| || || | || | || Sbjct 160793 CCGCGGCCGTCAGAAGGTCA---AGGCCCAGAAGCTGTGGTATGCCATTCTCGAAGCTCA 160737 Query 94482 GGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACC 94540 | ||||| || | |||| ||| | | |||||| | ||| |||| |||| ||||| Sbjct 160736 GACCGAGACTGGCAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACC 160678 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 || || ||||||| || ||||| || |||||||| || ||||| ||||| | Sbjct 160677 AGAAGAACCTCGGCACCATTCGCAGCTCAAACCTGTGCACTGAAATTGTGGAGTACTCGG 160618 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 | || || ||| | ||||| || ||| ||| || || || | |||||||| Sbjct 160617 CCCCCGATGAGGTCGCTGTCTGCAACTTGGCATCTCTCGCGCTACCATCTTTCGTG---- 160562 Query 94661 ATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTT-GTGAACTT-CGCGGGAAG 94718 | ||||| | | || | | ||| | || ||||| ||| || | | || | Sbjct 160561 --GACTACA--ACGAAGGCGT-ATACGACTTCCAGAAGCTTCACGAAGTTACCCAGGTCG 160507 Query 94719 GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGA 94778 | ||| |||||||||| | | |||||| ||||| |||||| ||||||||||| Sbjct 160506 --TCGTCCACAACCTGAACAAGATCATCGACGTGAACTACTACCCTGTCCCGGAGGCACG 160449 Query 94779 GAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCT 94838 ||| ||| || || || ||||||||| | || || |||||| | || ||| | | Sbjct 160448 CAACAGCAACATGCGACACCGTCCCATCGGCCTAGGTGTTCAGGGTCTTGCTGACACCTT 160389 Query 94839 GGTGATGATGCGTCTGCCCTACGACTCTGTCGACGC--GGCGGGTTTGAATTTGAACATA 94896 || | | || |||| | ||| || || || | | | |||| | | || Sbjct 160388 CTTGGCGCTTCGCATGCCTTTCGAGTCGCCAGAGGCTAGACAG--CTGAACAAGCAGATC 160331 Query 94897 TTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTC--CACTTGGCCAGATCGGACG 94954 ||||| | || || ||| ||| ||| | ||| || | ||| || | ||| | Sbjct 160330 TTCGAGACAATCTACCACGCTGCCTTGACAGCGTCC-TCGGAAATTGCTAAGGT-GGAGG 160273 Query 94955 GCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACC 95014 || ||| || | | | || || || | ||||||||| | |||| |||| Sbjct 160272 GC---CCATACTCCACTTACGAAGGCTCTCCTGTCTCACAGGGCATACTCCAGTACGACA 160216 Query 95015 TCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAA--GCTCTACGCGCTGATGTTAT 95072 | ||| ||| | ||| || | || | ||||||||| ||| | | | ||| | Sbjct 160215 TGTGGAATGTCACGCCGTCCGACCTTTGGGACTGGGAAACGCTGAAGGACCAGAT-CAAG 160157 Query 95073 CAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCA 95132 || | | |||||| |||| || | |||||||| |||||||| ||| || | || Sbjct 160156 CAGA-ATGGTGTGCGAAACAGTTTGTTGGTGGCCCCTATGCCCACTGCCAGTACCTCCCA 160098 Query 95133 GATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGT 95192 |||||| ||||||||||| | ||||| || | |||||||||| | ||| | || || Sbjct 160097 GATCCTGGGCAACAACGAATGTTTCGAGCCTTACACCTCCAACATCTACTCTCGCCGTGT 160038 Query 95193 GCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGG 95252 || || || || |||| ||| ||||| || || |||||| | | |||| Sbjct 160037 CCTTGCTGGCGAGTTCCAGGTCGTCAACCCTTGGCTGCTCAAGGACCTCGTGGATATGGG 159978 Query 95253 TGTGTGG---GGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAA 95309 | | ||| | || || | ||||||| | | || ||||||| | ||||| Sbjct 159977 TCTTTGGTCCGATGGCA---TGAAGAACCGCATCATTGCCGAAGGCGGCTCCATTCAGAA 159921 Query 95310 CATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCA 95369 ||| || | | || | ||||||||| | || |||||||| || ||||| || | || Sbjct 159920 CATTCCCAACGTTCCCGCAGACATCAAGTCTCTTTACAAGACAGTCTGGGAAATTTCTCA 159861 Query 95370 GCG 95372 ||| Sbjct 159860 GCG 159858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722581596000