Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 165 8e-36 seq15 132 5e-26 seq21 105 7e-18 seq72 104 2e-17 seq47 93.3 4e-14 >seq1 Length=3626568 Score = 165 bits (182), Expect = 8e-36 Identities = 356/527 (68%), Gaps = 33/527 (6%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGAC---ACC 52382 || || ||| ||||| ||||| | ||||| |||||||||| | |||| | Sbjct 1873275 GTCCCCTGCATTCGCCGGAAGGCCGATTGGGCCCTGAAGTGGATT---ACCGACCGGAAG 1873331 Query 52383 GCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 |||| | ||| ||||| || | ||||||||| |||||||| | || || |||| Sbjct 1873332 TCCACCTTTGCCCAGCGCCTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGC 1873391 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| || ||||||| | | || | | ||| | |||||||||||||| ||| | Sbjct 1873392 GCCTTCGCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCC 1873451 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CT------- 52554 |||||| | || ||||||||||| || |||||||| ||||| || ||||| || Sbjct 1873452 AACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTGTTCTCG 1873511 Query 52555 -ACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG 52613 || |||| ||| |||| || ||| | ||| || | ||| Sbjct 1873512 CACCTGAAGAACCGC----CCGAGCAA--------GGAGATCGTCCAGAAGGTCATCACC 1873559 Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 || || |||| ||||| ||||||| | || | || ||||| || ||||| ||| Sbjct 1873560 GATGCCGTGGAGATCGAGCAGGAGTTCCTCACCGAGGCCCTGCCCTGCGCCCTGCTCGGC 1873619 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||||| | |||| ||||||||||||| || || || || ||| | || Sbjct 1873620 ATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCC 1873679 Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTC--GCAATCCGTTTGAGTTTATGAACAACATT 52790 ||| |||| | | ||| || | ||||| ||| || || || || ||| | ||||| Sbjct 1873680 CTC-GGCAACGACAAGGTCT--ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATC 1873736 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| | |||||||||||||| ||||||||||| ||||||||||| Sbjct 1873737 TCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTA 1873783 >seq15 Length=644973 Score = 132 bits (146), Expect = 5e-26 Identities = 616/962 (64%), Gaps = 32/962 (3%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| || | || || | | || | ||| ||| ||| Sbjct 160009 GGTTGACGACCTGGAACTCGCCAGCAAGGACACGGCGAGAGTAGATGTTGGAGGTGTAAG 160068 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || || ||||||| ||||| || || || | || | || || ||||| |||| Sbjct 160069 GCTCGAAACATTCGTTGTTGCCCAGGATCTGGGAGGTACTGGCAGTGGGCATAGGGGCCA 160128 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 |||||||| || |||| || | | ||| | || | |||||||| || | ||| ||| Sbjct 160129 CCAACAAACTGTTTCGCACACCATTCTGCTTG-ATCTGGTCCTTCAGCGTTTCCCAGTCC 160187 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | ||||| || | ||||||||||||||||| | | || | | | ||| Sbjct 160188 CAAAGGTCGGACGGCGTGACATTCCACATGTCGTACTGGAGTATGCCCTGTGAGACAGGA 160247 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGC-CTCGAG 153325 ||| | | || ||| ||| || | || | ||| || || || || Sbjct 160248 GAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTTAGCAATTTCCGAGGACGCTGTCAAG 160307 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCTC 153383 || | | ||| || || ||| ||| || || || || | | | || ||| | Sbjct 160308 -GCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTTCAG--CTGTCTAGCCTCTGGCGAC 160364 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| | |||||||| ||| || |||| ||| || |||||||| | ||| | ||||||| Sbjct 160365 TCGAAAGGCATGCGAAGCGCCAAGAAGGTGTCAGCAAGACCCTGAACACCTAGGCCGATG 160424 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATA 153503 || || || | ||||||| | || || | || |||| || ||||| Sbjct 160425 GGACGGTGTCGCATGTTGCTGTTGCGTGCCTCCGGGACAGGGTAGTAGTTCACGTCGATG 160484 Query 153504 ATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC--AT 153561 || ||||| |||||| | || || || | || | | | ||| |||| ||| || || Sbjct 160485 ATCTTGTTCAGGTTGTGGACGACGACCTGGGTAACTTCGTGAAGCTTCTGGAAGTCGTAT 160544 Query 153562 AGGTCATTTCGTCGACGCGTACGCATCGAT-TCACGGCAATAGACGCCAGATTACAGACG 153620 | | | ||||| | | ||| | ||| | || | ||| |||| || ||||| Sbjct 160545 ACGCC--TTCGTTGTAGTCCACG-AAAGATGGTAGCGCGAGAGATGCCAAGTTGCAGACA 160601 Query 153621 GCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT---GCTGCATTTT 153677 || ||| |||| | | ||||| ||| || || | ||| ||||| ||||| Sbjct 160602 GCGACCTCATCGGGGGCCGAGTACTCCACAATTTCAGTGCACAGGTTTGAGCTGC---GA 160658 Query 153678 ATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTAC 153737 ||| ||| | || | ||| ||||| ||||| ||||| || ||| |||||||| | Sbjct 160659 ATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAG 160718 Query 153738 GGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGC 153794 || ||| |||||| || | ||||| || | ||| ||| | ||| || Sbjct 160719 GGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGCATACC---ACAGCTTCTGGGCCTTG 160775 Query 153795 ACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCG 153854 ||| ||| || ||||||||| |||||| |||||||| ||| ||||| || Sbjct 160776 ACCTTCTGACGGCCGCGGCCCTCAGCCTCGTACTTCTCGTACAAGGCCTCGAACTCATCA 160835 Query 153855 CCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCG 153914 |||||| ||||| ||||| || |||| | ||| ||||| || | |||| ||| || Sbjct 160836 CCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTCCAC---TCGCCG 160892 Query 153915 GCGTT---GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGC 153971 || ||| || |||||| || || || | ||| || || | ||||||||| Sbjct 160893 TTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAGAGGTCGCGA 160952 Query 153972 GC 153973 || Sbjct 160953 GC 160954 >seq21 Length=521316 Score = 105 bits (116), Expect = 7e-18 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| ||||| |||||| || || ||||| | | Sbjct 162952 CTCCTTCTGGATGTTGTAGTCGCTCAACGTACGACCGTCCTCCAGCTGCTTACCAGCGAA 163011 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTT--TGTTTTAAT 138540 || |||||||| || ||||| || || ||||| ||||| ||| | || | || || Sbjct 163012 AATGAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTC-CTGAATCTTGCTCTTCACAT 163070 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||||| ||||| | ||| | || || || || ||||| || Sbjct 163071 TG-TCGATGGTGTCCGATGACTCAACCTCCAGCGTGATGGTCTTCCCCGTAAGAGTCTTG 163129 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 163130 ACGAAGATCTGCAT 163143 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||||| | || || |||||| | || ||||||| Sbjct 163178 GATTCCTTCTGGATGTTGTAGTCGCTTAGCGTTCGGCCGTCCTCCAACTGCTTACCGGCG 163237 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||| || || ||||| || ||||| |||||| || | Sbjct 163238 AAGATAAGTCGCTGTTGGTCGGGCGGGATACCCTCCTTGTCCTGGATTTTGCTCTTCACG 163297 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| || | |||||| ||||| | || | || || || ||||| || || Sbjct 163298 TTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAGCGTCTTG 163357 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 163358 ACGAAGATCTGCAT 163371 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | || | | | |||||||| ||||||||||||||| Sbjct 163373 CCACCGCGGAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAA 163432 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || ||||| | |||| | ||||| ||||| ||||| Sbjct 163433 AGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 163492 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | |||| || | ||| || | |||||||| ||||| | Sbjct 163493 ATGCCCTCCTTGTC-CTGAATCTTTGACTTGACGTTG-TCAATGGTGTCGGAGGACTCAA 163550 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||||| || | ||| || || ||||| || || || Sbjct 163551 CCTCGAGGGTGATCGTCTTTCCGGTCAGGGTCTTGAC 163587 >seq72 Length=40277 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| | || || ||||||||| || || |||| | Sbjct 18688 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 18747 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATT 138541 || |||||||| ||||||||||| || || || ||||| ||| || | || ||| Sbjct 18748 AATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATT 18807 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||||| ||||||||||||||| || | || || || || || || || | Sbjct 18808 G-TCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGA 18866 Query 138602 CAAAAATCTGCATG 138615 | || ||||||||| Sbjct 18867 CGAAGATCTGCATG 18880 >seq47 Length=1462733 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| | || || |||||||| || || |||| | | Sbjct 1313787 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 1313728 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTG 138542 | |||||||| ||||||||||| || || || ||||| ||| | || | || |||| Sbjct 1313727 TCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC-CTGAATCTTCGACTTGACATTG 1313669 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| |||||||||||||| || | || || || ||||| || || || Sbjct 1313668 -TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1313610 Query 138603 AAAA 138606 ||| Sbjct 1313609 GAAA 1313606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261779672000