Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq15 178 2e-39 seq7 86.0 8e-12 >seq15 Length=644973 Score = 178 bits (196), Expect = 2e-39 Identities = 931/1461 (64%), Gaps = 55/1461 (4%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||| ||||| || || || ||||| |||| ||| |||| || | Sbjct 160050 TAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGTTGCCCAGGATCTGGGAGGTACTG 160109 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || |||||||| || |||| | | ||||| || | ||| | | | || | ||| Sbjct 160110 GCAGTGGGCATAGGGGCCACCAACAAACTGTTTCGCACACCATTCTGCTTGATCTGGTCC 160169 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTCCCACATATCAAACTGG 116079 || || | |||||||| | || | | | | | | |||||| || ||||| Sbjct 160170 TTCAGCGTTTCCCAGTCCCAA---AGGTCGGACGGCGTGACATTCCACATGTCGTACTGG 160226 Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139 || || || || || | || || || || | || ||||||||||| |||| || Sbjct 160227 AGTATGCCCTGTGAGACAGGAGAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTTAGCA 160286 Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT- 116198 | ||| ||| ||| | ||| ||||| || |||||||| || || | |||| Sbjct 160287 ATTTCCGAGGACGCTGTCAAGGCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTTCAGC 160346 Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACG--GCACAAAATAAATACATCCGCGAGA 116256 || || | |||| || || || | | || || | || | | || || ||| Sbjct 160347 TGTCTAG-CCTCTGGCGACTCGAAAGGCATGCGAAGCGCCAAGAAGGTG--TCAGCAAGA 160403 Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC--- 116313 || || ||||| ||||| || || || |||| ||| || || || || |||| Sbjct 160404 CCCTGAACACCTAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGTGC---CTCCGGG 160460 Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373 || || || | ||| ||||| | | | || || || | | ||| |||| || | | Sbjct 160461 ACAGGGTAGTAGTTCACGTCGATGATCTTGTTCAGGTTGTGGACGACGACCTGGGTAACT 160520 Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGGAAGG- 116430 || |||||||| | | | || | || |||| ||| | || | || || Sbjct 160521 TCGTGAAGCTTCTGGAAGTCGTATACGC------CTTCGTTGTAGTCCACGAAAGATGGT 160574 Query 116431 ---GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487 |||| || |||| || || |||| | |||||| | | |||||| | |||| Sbjct 160575 AGCGCGAGAGATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACTCCACAATT 160634 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 || || |||| ||||| || ||||||||| | |||||| || || ||| ||| Sbjct 160635 TCAGTGCACAGGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 160694 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607 || ||||||||||||||| | || | || ||||| || || | | |||||| || Sbjct 160695 CAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGCA 160754 Query 116608 TTCCATA-CATCGGCGGC-TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 116665 | ||| | | || | | | || | || || | | || ||||| |||||||||| Sbjct 160755 TACCACAGCTTCTGGGCCTTGACCTTCTGACG--GCCGCGGCCCTCAGCCTCGTACTTCT 160812 Query 116666 TGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGAC 116725 ||| | |||||| ||||| ||||| | || | || || || || | || | Sbjct 160813 CGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGC 160872 Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785 | | ||||| ||| | || || ||| || ||||||||||| ||||| || ||||| | Sbjct 160873 ACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAA 160932 Query 116786 GCGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844 | || |||||| || ||| || || | || || | || || || ||| | || Sbjct 160933 GAGCAAGGAAGAGGTCGCGAGCACGGATC-TCCTCTTTACCGTGGTTCTTACGGAGATCA 160991 Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGA 116904 | || || | | ||||| ||||||||| |||| ||| | || | | | || || Sbjct 160992 AGGAACTCGAAAACATCCGAGTGCCACGGCTCCAAGTAGATGGC-AAAGGCACCAGGCCG 161050 Query 116905 C----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAAT 116960 | ||| |||| | ||||| ||||| || ||| || || || ||||| || | Sbjct 161051 CTTGTTGCCACCCTGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGAC 161110 Query 116961 GATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCG 117018 |||||||| || || || || || ||| |||||| | |||| | | | Sbjct 161111 GATACCATTGGACGTTCCGTTAGTACCGGCGATGTACGAGCC--AGTGGCACGAATACGA 161168 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| | || ||| ||||| || ||| ||| ||||| || || | || | Sbjct 161169 TGGATATTCAAACCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTA 161228 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 ||||||| || ||||| ||| |||| | ||| ||||||||| || | || Sbjct 161229 TCGTAGATACCCTCGATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGC 161288 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GG 117196 | | ||||||||||||||||| |||||||| | || || |||| || ||| | Sbjct 161289 GCCTGAGGTGTACCAGCGTTGAAAAGGGTTGGGGAGGCATGAGTGAA-GTA-TTTGCCAG 161346 Query 117197 ACATCTTATCGTAGGTCTCCAAGAC---AGAGGGAATGTCTTCCCCGTGAATACCGATTG 117253 |||| | ||||||||| | ||| | |||| ||| | ||||||| | Sbjct 161347 ACATGAGGTTGTAGGTCTCAATGACCTTCTCTACATTGTCACCCCAG---ATACCGACAG 161403 Query 117254 AGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGT 117313 || ||||||| ||||| || ||| | || | | | ||||||||| || | |||| Sbjct 161404 CAACACGCATAATCATGTGCTGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGT 161463 Query 117314 AACTCTTCTCCAAGGTCTTGA 117334 | | |||||| ||||||| Sbjct 161464 AGGACCGCTCCAAAGTCTTGA 161484 >seq7 Length=944196 Score = 86.0 bits (94), Expect = 8e-12 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 12875 ACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGCAACTT 12933 ||||| ||||||||| || |||||||| | ||| || ||| || | || || || Sbjct 473353 ACCGATGGCGTCAATCTCATCAATGAATATGATGCAGGGTGTGTGTCTC-CGTGCCGTGG 473411 Query 12934 CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGG 12993 | |||| ||||| |||| |||||||||||||||||||||||||| || | | Sbjct 473412 CGAAGAGGTCTCGGACTCGGGACGCACCGACACCCACAAACATCTCCACGAATTCCGAAC 473471 Query 12994 CG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 13052 || || | || ||| || || || || |||||| |||| ||||| | ||| Sbjct 473472 CGCTCACGCT-GAAGAATGGTACTCCTGACTCGCCCGCGGTGGCCTTCGCGAGCAACGTC 473530 Query 13053 TTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 || ||||| || || ||| || || | |||||||| || ||| ||||||| Sbjct 473531 TTACCCGTTCCAGGCGGCCCAGCAAGGATTGCACCACGCGGAATCTTGGCACC 473583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506433116000