Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq72 163 3e-35 seq21 140 4e-28 seq47 132 5e-26 >seq72 Length=40277 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 |||||| | | |||| ||||| || | || |||||||| ||||| |||||||| || Sbjct 18652 GCCTCCGCGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 18711 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || || || |||| |||||||||||||||||||| |||| ||||||||||| | || Sbjct 18712 GAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGG 18771 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || |||||||||| |||||| |||||| | | | ||||||||||| ||||| Sbjct 18772 GATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCCAC 18831 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || |||||||| || || || || ||||| ||||| Sbjct 18832 CTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18879 >seq21 Length=521316 Score = 140 bits (154), Expect = 4e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| || | || |||||||| ||||| |||||||| || || ||||| | || ||| Sbjct 163671 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCG 163730 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || || | || |||||||||| ||| | || |||||||||| | Sbjct 163731 AGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGG 163790 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||||| ||| | | | ||||| || || || |||| |||||||| || Sbjct 163791 ATCTTTGACTTGA-CGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTT 163849 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||||| || || || || ||||| ||||| ||| Sbjct 163850 GCCCGTGAGAGTCTTGACGAAGATCTGCATCTTG 163883 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| || || || | || ||||||||||| || ||||| Sbjct 163408 CTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAA 163467 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||||| || | || |||||||||| ||||| ||||| ||| Sbjct 163468 GATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTTGACTTGA-CGT 163526 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||||| || || || ||||| || || | Sbjct 163527 TGTCAATGGTGTCGGAGGACTCAACCTCGAGGGTGATCGTCTTTCCGGTCAGGGTCTTGA 163586 Query 46581 C 46581 | Sbjct 163587 C 163587 >seq47 Length=1462733 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| || || || | || |||||||||||||||||||| | Sbjct 1313787 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 1313728 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 1313727 TCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGT 1313668 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| ||| ||||| || | |||||||| ||||||||||| || || || | Sbjct 1313667 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1313608 Query 46584 A 46584 | Sbjct 1313607 A 1313607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237693452000